Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001460.1 Hibiscus syriacus cultivar Beakdansim tig00002822_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66199

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
983--1037
27
2.0
27
92
0
92
45
3
12
38
1.60
4928--4963
18
2.0
18
88
0
54
13
27
33
25
1.94
11132--11156
12
2.1
12
100
0
50
40
0
44
16
1.47
15678--15723
21
2.2
20
80
3
56
50
2
2
45
1.26
19714--19792
31
2.5
30
84
8
95
37
13
15
32
1.87
21489--21568
35
2.4
34
83
8
101
37
0
1
61
1.04
21456--21563
35
3.1
33
80
11
94
34
0
3
62
1.13
21707--21760
17
3.2
17
72
0
54
31
0
3
64
1.11
23328--23455
21
6.1
21
88
5
116
19
32
25
23
1.98
23341--23455
42
2.7
42
90
2
169
19
33
26
20
1.97
23977--24073
33
2.9
34
85
3
124
56
4
2
37
1.30
23975--24080
34
3.2
32
82
8
122
55
4
1
37
1.32
24474--24846
128
2.9
128
93
0
622
32
20
24
23
1.98
24917--24957
8
5.2
8
82
5
57
36
29
0
34
1.58
30294--30328
7
5.0
7
92
0
61
17
14
25
42
1.86
36191--36238
25
1.9
25
86
0
69
50
16
18
14
1.79
36923--37004
40
2.0
40
95
0
146
34
28
14
23
1.94
43581--43617
12
3.1
12
88
0
56
35
24
13
27
1.93
43758--43801
22
2.0
22
100
0
88
31
13
9
45
1.75
44009--44140
44
2.9
44
80
10
142
34
20
6
39
1.77

Tables:   1

The End!