Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001461.1 Hibiscus syriacus cultivar Beakdansim tig00002823_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73881

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6354--6391
20
1.9
20
88
0
58
26
36
26
10
1.89
10623--10874
88
2.8
89
83
5
276
19
13
9
57
1.62
10622--10924
30
10.1
29
77
9
272
18
13
9
59
1.60
10861--10938
39
2.0
38
82
9
95
16
15
7
60
1.57
10881--10962
39
2.1
38
84
6
103
14
14
6
64
1.46
18063--18099
19
2.0
18
89
5
56
48
0
0
51
1.00
19191--19284
21
4.5
21
75
7
75
37
23
19
20
1.94
19192--19307
42
2.8
42
82
2
117
34
25
17
23
1.96
19689--19786
49
2.0
49
97
0
187
27
6
31
34
1.81
20690--20724
15
2.2
16
95
5
63
54
0
14
31
1.40
21622--21679
21
2.8
21
84
5
73
27
20
15
36
1.93
38937--38992
20
2.8
20
97
0
103
30
17
17
33
1.94
39041--39098
20
2.7
22
76
10
66
37
20
25
15
1.92
48029--48256
113
2.0
113
99
0
447
31
18
18
32
1.95
51497--51540
16
2.8
16
86
6
54
20
18
13
47
1.82
56922--56976
16
3.4
16
80
7
67
16
12
16
54
1.71
62808--62850
22
2.0
22
95
0
77
30
13
6
48
1.69
71943--71985
21
2.0
21
100
0
86
27
13
34
23
1.93
73238--73326
30
3.0
29
80
6
99
23
47
6
22
1.75
73410--73547
72
1.9
74
85
5
192
23
49
5
21
1.71
73594--73630
18
2.1
18
89
0
56
27
62
0
10
1.28

Tables:   1

The End!