Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001462.1 Hibiscus syriacus cultivar Beakdansim tig00002826_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75062

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
87--242
60
2.6
59
75
8
140
37
12
14
36
1.83
2169--2245
2
40.0
2
92
7
133
50
0
0
49
1.00
3464--3506
2
21.5
2
100
0
86
48
0
0
51
1.00
3621--3658
2
19.0
2
100
0
76
50
0
0
50
1.00
21338--21376
18
2.2
17
86
4
51
53
2
0
43
1.14
21345--21380
17
2.1
18
94
5
65
55
0
0
44
0.99
22757--22820
3
20.3
3
83
3
65
56
0
0
43
0.99
22747--22820
18
4.4
17
80
16
84
54
0
0
45
1.00
22973--23612
76
8.4
76
95
0
1145
34
20
22
22
1.96
22973--23612
229
2.8
228
95
0
1154
34
20
22
22
1.96
22973--23612
153
4.2
153
96
0
1149
34
20
22
22
1.96
24289--24343
22
2.5
23
82
8
69
38
12
12
36
1.82
31232--31789
278
2.0
278
98
0
1071
46
12
15
24
1.81
34738--34808
22
3.3
22
88
5
92
54
1
0
43
1.08
34745--34796
22
2.4
22
100
0
104
57
0
0
42
0.98
36189--36262
3
25.3
3
78
10
82
58
0
0
41
0.98
36179--36242
9
6.7
9
76
16
58
57
0
0
42
0.98
36177--36259
12
6.8
12
77
15
73
56
0
0
43
0.99
36177--36263
15
5.7
15
81
8
79
56
0
0
43
0.99
43391--43454
32
2.0
32
100
0
128
40
15
25
18
1.90
43495--43548
24
2.3
23
79
14
58
51
0
9
38
1.34
46030--46110
41
2.0
41
92
0
135
43
14
17
24
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46240--46305
18
3.7
18
85
0
87
39
15
12
33
1.84
48787--48857
29
2.4
30
81
9
83
35
14
2
47
1.58
48807--48863
29
1.9
30
82
3
71
35
19
3
42
1.68
52019--52099
41
2.0
41
92
0
135
41
16
16
25
1.88
52195--52297
18
5.9
18
70
13
72
38
13
12
34
1.83
63523--63576
27
2.0
28
88
3
83
66
1
1
29
1.12
64216--64260
24
1.9
24
90
4
74
2
8
26
62
1.37
64771--64841
25
2.8
26
82
8
83
52
2
1
43
1.24
64772--64863
28
3.4
26
76
18
89
50
4
1
44
1.29
64835--64990
44
3.5
43
81
11
167
42
10
2
44
1.52
64847--64996
22
6.7
22
76
11
119
43
10
2
43
1.53
65720--65815
50
1.9
51
85
6
133
27
13
19
39
1.89
73705--73757
26
2.0
26
88
0
79
22
20
30
26
1.98

Tables:   1

The End!