Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001463.1 Hibiscus syriacus cultivar Beakdansim tig00002827_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62782

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
509--554
2
23.0
2
100
0
92
50
0
0
50
1.00
6046--6109
31
2.1
31
88
5
94
23
40
20
15
1.90
8470--8584
24
4.8
24
89
4
160
25
13
20
41
1.88
8467--8607
48
2.9
48
84
1
174
25
10
20
43
1.84
13104--13212
24
4.5
24
81
4
121
26
12
19
41
1.87
13104--13212
48
2.3
48
85
0
146
26
12
19
41
1.87
15709--15771
21
2.8
22
78
17
67
47
12
34
4
1.63
16171--16250
41
2.0
40
82
7
99
27
16
18
37
1.92
32086--32134
26
2.0
25
84
15
66
28
14
4
53
1.59
32099--32156
26
2.2
26
81
6
64
25
15
5
53
1.63
36121--36172
20
2.7
19
80
11
61
25
1
1
71
1.07
50212--50263
21
2.5
21
93
0
86
36
11
17
34
1.86

Tables:   1

The End!