Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001467.1 Hibiscus syriacus cultivar Beakdansim tig00002842_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63200

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6539--6595
30
1.9
30
96
0
105
43
1
33
21
1.63
9199--9321
60
2.0
60
84
3
158
39
6
23
30
1.80
18221--18266
20
2.3
20
88
0
65
30
23
17
28
1.97
25689--25728
21
1.9
21
85
10
55
27
17
22
32
1.96
32928--32973
2
23.0
2
100
0
92
50
0
0
50
1.00
35268--35329
32
2.0
32
83
3
81
58
9
6
25
1.54
41519--41596
35
2.2
34
84
6
102
42
15
0
42
1.47
41591--41665
35
2.1
35
87
4
107
34
1
22
41
1.63
51355--51415
32
1.9
32
86
3
88
37
6
9
45
1.63
51358--51427
32
2.2
31
82
7
79
42
5
10
41
1.62
52321--52367
24
2.0
24
95
0
85
40
8
10
40
1.70
55091--55261
85
2.0
84
94
1
297
37
15
14
32
1.88
57052--57099
2
24.0
2
100
0
96
50
0
0
50
1.00

Tables:   1

The End!