Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001473.1 Hibiscus syriacus cultivar Beakdansim tig00002856_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78299

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
125--151
13
2.1
13
100
0
54
7
59
33
0
1.25
838--992
3
53.0
3
81
10
187
61
1
1
34
1.15
2161--2192
2
16.0
2
100
0
64
50
0
0
50
1.00
6770--6802
6
5.5
6
100
0
66
63
36
0
0
0.95
11969--12011
20
2.2
20
95
0
77
23
18
4
53
1.63
18056--18355
81
3.7
81
76
10
281
30
18
17
33
1.94
18056--18355
163
1.8
163
83
7
394
30
18
17
33
1.94
18136--18386
81
3.1
81
76
4
202
29
19
18
31
1.96
27919--28193
139
2.0
139
98
0
532
48
10
9
31
1.70
29579--29664
27
3.3
26
84
7
79
62
0
3
33
1.12
29605--29664
3
20.0
3
92
0
102
63
0
3
33
1.11
30671--30785
58
2.0
59
87
1
169
39
13
13
33
1.84
31856--31880
2
12.5
2
100
0
50
52
0
0
48
1.00
31934--32014
36
2.3
35
78
6
90
19
37
11
32
1.87
40586--40636
16
3.2
17
71
23
56
43
0
21
35
1.53
41320--41357
2
19.0
2
100
0
76
50
0
0
50
1.00
41860--42021
87
1.9
87
89
0
252
42
11
12
32
1.80
42271--42847
182
3.2
181
88
3
826
29
15
12
42
1.83
43893--43935
15
2.6
17
82
14
54
55
0
2
41
1.12
43737--44723
322
3.0
323
88
6
1391
43
8
4
42
1.56
47887--47940
17
3.2
16
75
14
56
79
3
5
11
1.02
48000--48037
17
2.2
17
86
9
51
76
7
5
10
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48180--48320
3
47.3
3
73
16
89
64
2
3
29
1.22
48105--48310
102
2.1
94
86
11
276
63
2
4
28
1.29
48194--48322
37
3.5
35
77
12
114
65
1
3
28
1.19
48277--48345
24
2.9
24
78
4
68
63
2
4
28
1.28
48839--48863
7
3.6
7
100
0
50
72
0
0
28
0.86
48861--48907
2
24.5
2
80
8
53
44
0
4
51
1.21
49290--49337
18
2.8
18
90
6
73
4
10
2
83
0.87
52522--52558
2
18.5
2
100
0
74
48
0
0
51
1.00
53052--53102
16
3.2
17
71
23
56
43
0
21
35
1.53
53139--53175
16
2.3
16
95
0
65
37
0
35
27
1.57
53996--54035
20
2.0
20
95
0
71
22
5
37
35
1.76
61267--61326
24
2.8
20
73
24
50
30
35
0
35
1.58
66308--66398
46
2.0
47
82
2
112
45
19
14
20
1.85
66369--66440
23
3.1
23
75
2
72
44
13
15
26
1.84
74954--74982
2
14.5
2
100
0
58
51
0
0
48
1.00
75145--75189
13
3.5
13
90
0
63
33
13
22
31
1.92
75145--75216
26
2.7
26
82
4
72
31
13
22
31
1.93

Tables:   1

The End!