Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001475.1 Hibiscus syriacus cultivar Beakdansim tig00002860_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96055

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8188--8234
23
2.0
23
83
0
58
51
0
2
46
1.13
9857--9896
3
12.7
3
89
10
62
65
0
0
35
0.93
17381--17430
20
2.5
20
100
0
100
34
14
32
20
1.92
17466--17503
20
1.9
20
88
0
58
13
28
31
26
1.93
18530--18641
24
4.8
23
77
10
104
21
24
25
29
1.99
21267--21301
6
5.8
6
93
0
52
45
14
5
34
1.68
21577--21623
17
2.7
17
96
3
85
57
6
14
21
1.60
22244--22291
13
3.9
13
78
15
57
66
14
8
10
1.43
22210--22291
23
3.5
23
74
9
67
65
17
8
8
1.44
25487--25572
27
3.3
26
73
20
72
48
1
1
48
1.16
25503--25581
17
4.4
18
72
24
69
49
1
0
49
1.09
25511--25577
22
2.8
24
76
19
68
50
1
0
47
1.10
25484--25658
55
3.1
56
76
16
148
47
2
1
48
1.24
25629--25672
17
2.4
18
81
11
54
54
0
0
45
0.99
25703--25739
19
1.9
19
88
0
56
56
0
0
43
0.99
28428--28465
6
6.3
6
100
0
76
18
31
34
15
1.92
32042--32114
20
3.7
20
90
0
101
15
23
19
42
1.88
32103--32152
21
2.4
21
100
0
100
24
16
30
30
1.96
32080--32182
21
5.1
20
76
6
57
20
17
23
38
1.93
32168--32239
22
3.4
22
73
11
87
18
18
25
38
1.92
32168--32261
41
2.3
41
92
0
161
20
17
22
40
1.91
32169--32230
19
3.1
19
69
6
52
19
16
24
40
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32189--32255
19
3.4
19
68
11
53
17
17
20
43
1.88
32900--32930
6
5.3
6
96
3
55
0
16
54
29
1.42
36105--36137
16
2.1
16
94
0
57
33
12
21
33
1.90
36184--36247
27
2.4
27
100
0
128
26
12
17
43
1.84
38439--38479
19
2.2
19
86
4
57
63
0
7
29
1.21
38814--38912
44
2.2
44
84
7
121
40
17
14
28
1.88
39733--39794
26
2.4
26
89
5
90
27
16
20
35
1.94
40652--40701
24
2.0
26
88
7
77
22
14
2
62
1.42
49785--49856
21
3.4
21
78
14
76
37
29
9
23
1.87
50410--50447
19
2.0
20
89
5
60
26
23
18
31
1.97
50471--50522
20
2.5
22
82
14
67
26
28
15
28
1.96
59793--59841
3
16.0
3
91
4
80
34
2
0
63
1.06
61470--61748
148
1.9
148
86
5
397
37
6
7
47
1.58
64039--64069
14
2.2
14
94
0
53
6
12
25
54
1.62
64238--64353
10
11.2
10
68
18
51
14
10
15
59
1.61
64285--64370
24
3.6
24
74
3
84
12
11
17
58
1.63
69590--69691
29
3.6
29
82
7
138
31
40
0
27
1.63
72948--73000
17
3.2
16
82
17
65
33
0
1
64
1.05
75797--75846
24
2.1
24
81
7
57
48
8
10
34
1.66
75810--75862
24
2.2
24
96
0
97
41
9
16
32
1.81
76739--76807
30
2.3
30
82
5
77
43
1
1
53
1.18
85694--85835
72
2.0
71
93
2
241
33
10
16
40
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85988--86068
39
2.1
39
90
4
128
50
12
2
34
1.53
88831--88982
80
1.9
80
87
5
227
17
5
34
41
1.74
90897--90971
39
2.0
37
85
10
100
53
12
0
34
1.38

Tables:   1

The End!