Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000148.1 Hibiscus syriacus cultivar Beakdansim tig00000263_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28454

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3264--3306
23
1.9
22
85
4
59
39
0
13
46
1.44
4803--4855
18
2.9
18
91
0
88
26
32
20
20
1.98
5097--5140
2
22.0
2
100
0
88
50
0
0
50
1.00
12011--12037
14
1.9
14
100
0
54
29
14
22
33
1.94
14291--14322
16
2.0
16
93
0
55
21
18
21
37
1.94
15288--15314
3
9.0
3
100
0
54
66
0
33
0
0.92
15397--15459
31
2.0
31
84
0
81
50
19
17
12
1.77
15694--15731
19
2.1
18
85
14
51
52
2
5
39
1.38
16055--16112
21
2.9
19
85
9
89
50
1
5
43
1.35
18169--18234
22
3.0
22
84
0
78
54
21
10
13
1.69
20233--20263
2
15.5
2
100
0
62
51
0
0
48
1.00
21386--21518
65
2.1
65
90
4
207
29
24
17
29
1.97
27310--27380
23
3.2
22
73
15
65
26
21
22
29
1.99
27284--27385
44
2.3
44
84
3
134
29
20
20
29
1.98
27846--27884
13
2.9
13
92
3
60
35
12
7
43
1.72

Tables:   1

The End!