Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001491.1 Hibiscus syriacus cultivar Beakdansim tig00002898_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49584

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3349--3395
3
16.0
3
84
4
60
59
2
2
36
1.21
5615--5659
21
2.1
21
83
0
54
40
4
6
48
1.49
6870--6904
12
2.8
13
95
4
56
60
5
0
34
1.21
6874--6904
12
2.6
12
100
0
62
58
6
0
35
1.24
7060--7185
60
2.1
59
80
4
137
36
15
3
43
1.66
12231--12271
10
4.1
10
83
0
55
31
29
0
39
1.57
12313--12353
18
2.3
18
91
4
66
29
4
0
65
1.13
14031--14069
18
2.2
18
95
0
69
23
30
23
23
1.99
14651--14735
35
2.5
33
76
14
82
25
9
10
54
1.65
18957--19087
60
2.2
60
82
8
160
33
23
3
39
1.70
24917--24962
22
2.0
23
87
8
67
32
0
0
67
0.91
24921--24960
17
2.3
19
83
16
59
30
0
0
70
0.88
41426--41455
3
10.0
3
92
0
51
0
36
0
63
0.95
48195--48231
3
12.3
3
100
0
74
32
0
0
67
0.91

Tables:   1

The End!