Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001492.1 Hibiscus syriacus cultivar Beakdansim tig00002904_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72598

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4839--4932
47
2.1
44
84
6
116
29
14
20
35
1.93
5194--5324
36
3.6
36
96
0
235
28
7
21
42
1.80
7302--7331
16
1.9
16
93
6
53
33
6
0
60
1.23
7545--7590
2
23.0
2
100
0
92
50
0
0
50
1.00
9606--9630
12
2.1
12
100
0
50
0
32
0
68
0.90
10854--10885
6
5.3
6
96
0
55
37
12
0
50
1.41
14391--14446
19
2.9
19
76
5
58
39
0
0
60
0.97
14391--14435
20
2.3
19
84
3
54
40
0
0
60
0.97
22431--22476
21
2.2
21
100
0
92
23
23
32
19
1.97
42184--42225
18
2.3
19
87
4
59
54
4
0
40
1.21
42191--42233
18
2.4
17
77
11
50
58
4
0
37
1.19
47453--47497
2
22.5
2
91
8
74
48
2
0
48
1.13
48724--48767
21
2.1
21
83
8
54
27
2
2
68
1.14
48787--48833
2
23.5
2
91
0
76
44
0
4
51
1.21
48909--48944
4
8.8
4
93
6
63
22
2
0
75
0.94
48912--49002
9
9.9
9
79
11
53
16
6
3
73
1.17
48909--49014
13
8.5
13
75
15
66
16
6
3
73
1.19
48968--49005
14
2.8
13
92
4
58
21
0
2
76
0.91
48908--49002
5
20.6
5
84
8
53
15
6
3
74
1.14
48973--49099
59
2.3
55
82
9
150
14
9
6
69
1.35
58049--58097
20
2.5
20
84
15
66
83
2
12
2
0.82
58052--58097
14
3.3
13
80
14
56
84
2
10
2
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58136--58181
8
5.6
8
97
2
83
78
0
21
0
0.76
58136--58188
24
2.2
25
90
10
83
77
0
22
0
0.77
59142--59335
88
2.2
88
80
7
225
35
23
15
24
1.94
61156--61375
14
18.8
12
71
19
62
33
2
2
62
1.20
61122--61241
57
2.2
54
81
8
129
29
3
0
66
1.13
61257--61315
2
29.5
2
100
0
118
49
0
0
50
1.00
61398--61469
5
14.6
5
87
8
103
16
1
2
79
0.93
61394--61493
39
2.6
39
84
9
98
16
5
4
75
1.14
63681--63756
37
2.1
37
94
0
134
53
15
10
19
1.70
68448--68554
46
2.4
44
83
7
128
29
16
14
39
1.88
69474--69521
18
2.7
18
80
0
60
29
35
18
16
1.93
69551--69588
16
2.4
16
86
8
51
23
26
23
26
2.00
71160--71225
22
3.2
21
81
10
75
31
16
22
28
1.96
71538--71819
54
5.3
54
91
1
426
29
19
20
30
1.97
71790--72407
53
11.6
55
83
6
720
34
19
18
27
1.95

Tables:   1

The End!