Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001496.1 Hibiscus syriacus cultivar Beakdansim tig00002911_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71611

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4479--4522
23
1.9
22
81
9
52
31
18
13
36
1.90
6465--6514
19
2.5
20
90
6
75
34
10
8
48
1.66
14852--14937
12
7.6
12
66
23
53
73
1
24
1
0.98
14854--14905
24
2.2
24
89
6
79
76
0
23
0
0.78
14871--14937
12
5.4
12
77
12
55
73
1
23
1
1.00
30986--31054
33
2.1
33
83
5
86
31
1
36
30
1.67
35454--35522
33
2.1
33
83
5
86
31
1
36
30
1.67
45220--45261
22
1.9
22
85
9
59
35
0
19
45
1.50
65876--65919
6
7.2
6
84
5
61
79
2
18
0
0.83
65873--65919
25
1.9
24
91
4
76
78
4
17
0
0.90
65876--65917
19
2.3
18
87
4
57
80
2
16
0
0.81
65943--65985
5
8.4
5
80
14
52
76
2
18
2
1.00
65943--65985
11
4.1
11
82
11
54
76
2
18
2
1.00
69186--69231
18
2.5
18
89
3
65
32
15
6
45
1.71

Tables:   1

The End!