Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000150.1 Hibiscus syriacus cultivar Beakdansim tig00000267_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68344

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1347--1374
14
2.0
14
100
0
56
21
14
21
42
1.88
5519--5614
30
3.2
30
100
0
192
33
3
6
57
1.39
14009--14050
20
2.1
20
100
0
84
38
19
23
19
1.93
16407--16451
20
2.2
20
84
7
56
28
0
31
40
1.57
16544--16573
2
15.0
2
100
0
60
50
0
0
50
1.00
21458--21502
20
2.2
20
84
7
56
28
0
31
40
1.57
22971--23047
31
2.5
31
82
2
100
28
31
25
14
1.95
22924--23047
63
2.0
63
82
6
153
26
29
27
16
1.97
23922--23976
17
3.4
16
85
12
78
14
23
43
18
1.87
23930--23974
14
3.0
14
90
9
63
11
22
46
20
1.81
23972--24021
9
5.1
10
74
13
50
28
30
22
20
1.98
23970--24021
20
2.7
19
87
3
68
26
28
25
19
1.98
24047--24073
9
3.0
9
100
0
54
0
33
55
11
1.35
30260--30336
31
2.5
31
80
2
91
28
29
25
15
1.96
31219--31273
17
3.4
16
85
12
78
14
23
43
18
1.87
31227--31271
14
3.0
14
90
9
63
11
22
46
20
1.81
31269--31318
9
5.1
10
74
13
50
28
30
22
20
1.98
31267--31318
20
2.7
19
87
3
68
26
28
25
19
1.98
36612--36648
13
2.8
13
91
0
56
10
18
13
56
1.66
37627--37686
32
1.9
31
82
3
75
45
6
3
45
1.46
41145--41173
14
2.1
14
100
0
58
27
6
20
44
1.77
43708--43790
31
2.7
31
94
0
139
8
32
33
25
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43708--43807
31
3.2
31
89
0
101
13
29
31
27
1.93
49992--50037
20
2.3
20
84
0
56
30
34
21
13
1.91
50772--50891
31
3.9
31
76
4
116
15
28
27
28
1.96
52168--52240
37
2.0
37
100
0
146
43
19
6
30
1.76
52457--52498
22
1.9
22
90
0
66
42
40
11
4
1.63
53235--53286
14
3.9
14
80
5
54
44
23
3
28
1.71
53235--53298
26
2.4
28
84
5
87
43
25
3
28
1.69
54194--54243
23
2.1
24
85
3
66
20
12
20
48
1.80
54201--54243
12
3.7
12
75
6
52
18
9
20
51
1.74
54204--54255
24
2.2
23
89
3
77
17
11
23
48
1.79
54266--54310
22
2.0
22
83
8
56
15
8
17
57
1.63
54280--54310
11
2.8
11
100
0
62
16
6
19
58
1.59
60896--60949
22
2.5
22
96
0
99
61
9
11
18
1.55
65132--65191
26
2.3
26
94
2
104
35
26
11
26
1.91
66892--66922
12
2.5
13
94
5
55
9
0
0
90
0.46
66991--67089
39
2.6
37
80
10
119
29
2
3
65
1.18
66991--67089
37
2.6
36
83
13
119
29
2
3
65
1.18
67005--67246
4
60.5
4
68
19
71
21
5
2
71
1.17
66993--67148
36
4.2
37
79
10
122
23
3
2
69
1.17
67173--67206
15
2.3
15
90
10
52
17
11
2
67
1.34

Tables:   1

The End!