Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001508.1 Hibiscus syriacus cultivar Beakdansim tig00002953_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98425

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
684--1195
228
2.3
227
82
8
589
33
16
14
36
1.88
3655--3690
17
2.2
17
90
5
56
41
0
13
44
1.44
9766--9795
12
2.4
13
94
5
53
36
0
6
56
1.26
10653--10686
17
2.1
17
88
5
52
41
2
11
44
1.56
12481--12557
12
6.4
12
74
16
52
5
15
2
76
1.07
12481--12523
12
3.6
12
84
9
61
6
13
0
79
0.93
12489--12604
49
2.4
48
80
9
112
4
20
1
73
1.10
12539--12587
19
2.6
17
79
17
53
6
22
0
71
1.08
20196--20409
54
4.0
54
89
3
333
37
18
13
30
1.89
20199--20409
108
2.0
108
94
1
370
37
18
12
30
1.89
22048--22104
21
2.7
21
94
0
96
28
26
26
19
1.99
22340--22438
33
3.0
33
94
1
164
45
15
7
32
1.73
22433--22474
21
2.0
21
95
0
75
47
7
14
30
1.71
24904--24960
28
2.1
28
84
12
75
19
17
15
47
1.83
26022--26196
60
2.9
58
77
5
154
42
4
16
36
1.69
26434--26488
19
2.8
19
83
5
56
41
0
1
56
1.10
37025--37064
6
6.7
6
100
0
80
0
0
85
15
0.61
37236--37297
31
2.0
31
90
0
97
46
16
14
22
1.83
38513--38569
26
2.1
27
93
3
98
28
19
22
29
1.98
43092--43491
221
1.8
220
82
8
526
29
21
17
31
1.96
43081--43495
55
7.5
54
83
6
437
29
21
17
31
1.96
43511--43645
36
3.7
36
88
4
200
25
20
15
38
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43505--43645
72
1.9
73
91
1
230
24
19
15
39
1.91
45795--45987
101
1.9
101
88
0
287
30
19
16
34
1.94
46539--46573
13
2.7
13
100
0
70
60
14
8
17
1.58
51031--51095
32
2.0
33
82
14
82
33
23
10
32
1.89
73247--74089
268
3.2
262
87
3
1244
32
15
17
34
1.92
74228--74334
3
36.0
3
83
5
110
39
2
0
57
1.13
74254--74328
26
2.8
26
95
2
132
41
4
0
54
1.19
75954--75998
15
3.1
15
83
3
56
24
0
4
71
1.05
76031--76101
29
2.4
30
83
6
92
19
23
4
52
1.64
76049--76110
29
2.1
29
90
0
97
20
19
4
54
1.62
79090--79137
21
2.4
21
83
16
66
68
6
6
18
1.32
93196--93225
3
10.0
3
100
0
60
33
0
0
66
0.92

Tables:   1

The End!