Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001510.1 Hibiscus syriacus cultivar Beakdansim tig00002956_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52994

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5936--5985
13
4.0
13
79
10
50
72
2
0
26
0.96
6371--6409
17
2.4
16
87
12
53
23
2
0
74
0.94
9346--9375
2
15.0
2
100
0
60
50
0
0
50
1.00
14441--14562
22
5.5
22
87
0
163
28
23
18
29
1.97
14441--14562
44
2.8
44
92
0
190
28
23
18
29
1.97
14441--14573
66
2.0
66
88
0
194
28
22
18
30
1.97
17491--17881
54
7.2
54
90
1
566
25
19
21
33
1.97
17491--17881
109
3.6
109
90
1
581
25
19
21
33
1.97
17500--17881
163
2.3
163
89
0
586
25
19
21
33
1.97
19661--19742
21
3.9
21
85
0
92
30
29
17
23
1.97
20440--20517
24
3.4
24
68
13
74
30
19
14
35
1.91
20440--20537
44
2.2
44
87
3
144
29
19
16
34
1.94
34382--34406
12
2.1
12
100
0
50
44
16
8
32
1.76
42048--42087
18
2.3
18
91
4
64
40
27
30
2
1.70
48571--48605
18
1.9
18
88
0
52
25
31
20
22
1.98
50295--50348
15
3.1
16
76
23
56
22
27
16
33
1.95

Tables:   1

The End!