Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001511.1 Hibiscus syriacus cultivar Beakdansim tig00002957_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68085

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3779--3888
56
2.0
56
81
0
130
29
16
30
24
1.96
12174--12248
2
37.5
2
94
0
132
50
2
0
46
1.15
13192--13232
17
2.3
18
87
4
57
51
0
7
41
1.30
13832--13888
25
2.2
26
75
12
64
59
1
7
31
1.34
20511--20551
8
5.2
8
82
5
57
34
0
29
36
1.58
20632--21238
128
4.7
128
96
0
1117
20
24
21
32
1.98
21602--21708
34
3.1
34
87
0
151
36
1
4
57
1.31
22229--22322
21
4.5
21
85
7
129
22
27
31
18
1.97
22256--22335
42
1.9
41
82
14
101
27
23
30
18
1.98
24104--24183
34
2.4
33
81
8
92
60
1
0
38
1.05
34572--34928
179
2.0
176
90
1
552
40
14
15
30
1.86
34906--34944
20
2.0
20
94
0
69
38
15
10
35
1.81
34733--35229
197
2.5
196
88
4
725
39
13
15
31
1.86
34733--35288
197
2.8
196
84
5
669
40
13
15
30
1.85
40143--40182
20
2.0
20
90
0
62
32
10
22
35
1.87
43422--43501
32
2.6
30
82
7
106
38
22
17
21
1.93
44641--44730
32
2.9
30
77
11
76
34
23
17
24
1.96
44672--44732
32
1.9
32
86
0
86
34
26
14
24
1.94
47427--47463
2
18.5
2
100
0
74
51
0
0
48
1.00
48133--48176
20
2.1
21
84
12
56
54
6
9
29
1.58
48931--49010
23
3.4
23
85
1
97
32
23
18
25
1.97
49144--49200
15
3.9
15
81
2
62
40
22
5
31
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49436--49471
2
18.0
2
100
0
72
50
0
0
50
1.00
55062--55160
23
4.3
23
76
13
89
35
20
16
28
1.94
55585--55613
2
14.5
2
100
0
58
51
0
0
48
1.00
56063--56112
21
2.5
20
80
9
57
34
26
10
30
1.89

Tables:   1

The End!