Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001512.1 Hibiscus syriacus cultivar Beakdansim tig00002958_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66852

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1269--1318
23
2.2
23
81
0
55
24
24
16
36
1.94
2593--2664
37
2.0
36
94
2
126
0
18
6
75
1.02
2539--2657
53
2.3
51
78
8
123
2
15
6
74
1.13
2598--2671
30
2.4
30
88
6
105
0
17
6
75
1.01
3424--3497
20
3.7
20
92
3
130
41
5
8
44
1.57
3424--3512
40
2.2
40
88
4
126
43
5
10
40
1.62
14820--14859
19
2.0
20
90
4
64
20
15
0
65
1.28
14816--14862
19
2.6
18
83
12
60
19
14
0
65
1.26
20395--20449
23
2.4
23
96
0
101
30
34
3
30
1.75
20395--20467
11
6.3
11
72
21
60
31
34
2
31
1.72
20867--20910
12
3.6
11
82
17
52
75
2
22
0
0.92
26102--26186
11
7.2
11
72
22
66
31
36
3
28
1.74
26099--26203
36
2.9
36
95
1
185
30
36
4
28
1.78
27837--27861
13
1.9
13
100
0
50
28
40
0
32
1.57
39031--39077
14
3.1
15
75
12
51
72
6
19
2
1.17
50901--50952
26
1.9
28
85
14
74
57
0
26
15
1.38
51129--51153
13
1.9
13
100
0
50
40
0
32
28
1.57
52269--52307
20
1.9
21
84
5
53
46
12
0
41
1.42
65257--65307
20
2.6
20
90
3
77
35
15
5
43
1.71

Tables:   1

The End!