Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001516.1 Hibiscus syriacus cultivar Beakdansim tig00002963_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79200

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2694--2761
31
2.3
29
85
10
84
36
10
17
35
1.84
3566--3657
31
3.0
31
80
3
105
28
19
20
31
1.97
3538--3657
62
1.9
62
83
8
154
30
17
19
33
1.95
9942--10201
43
6.2
41
77
4
211
32
18
19
29
1.96
9942--10216
40
6.6
41
76
7
209
32
19
18
29
1.96
9942--10170
82
2.7
83
82
6
284
34
18
19
27
1.96
9942--10201
82
3.1
79
78
12
254
32
18
19
29
1.96
9942--10201
42
6.2
41
77
3
220
32
18
19
29
1.96
12101--12138
20
1.9
20
88
0
58
21
26
10
42
1.85
13876--13919
15
2.9
15
89
3
70
54
0
0
45
0.99
13920--14039
22
5.5
21
69
22
77
44
4
3
48
1.38
13920--14043
44
2.8
44
88
0
185
44
4
3
47
1.40
14610--14660
21
2.5
20
72
18
50
52
1
35
9
1.46
20232--20343
56
2.0
56
98
0
215
33
18
16
31
1.93
24660--24718
2
29.5
2
100
0
118
49
0
0
50
1.00
24760--24790
2
15.5
2
100
0
62
48
0
0
51
1.00
24886--24942
23
2.4
24
80
14
64
26
5
1
66
1.22
24823--24941
57
2.1
58
82
7
145
27
7
1
63
1.31
25020--25065
23
2.0
23
83
8
58
15
6
2
76
1.09
25021--25117
19
5.7
18
73
15
64
15
6
4
74
1.17
25072--25191
5
23.0
5
74
17
68
15
6
3
75
1.15
25076--25160
20
4.2
20
75
12
84
15
5
3
75
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25073--25188
61
1.9
60
83
11
148
14
6
3
75
1.15
34697--34860
3
54.0
3
88
2
247
34
1
1
62
1.14
47614--47686
25
2.9
27
84
11
93
83
0
16
0
0.64
47614--47687
27
2.9
26
80
11
91
83
0
16
0
0.64
47614--47688
32
2.5
29
87
10
107
84
0
16
0
0.63
48617--49798
52
22.8
52
98
0
2246
23
15
21
39
1.91
50435--51210
114
6.8
113
91
2
1214
37
13
20
28
1.91
50430--51210
227
3.4
227
93
1
1298
37
13
20
28
1.91
51463--51625
3
54.0
3
90
1
254
34
1
1
62
1.14
57920--58057
5
27.0
5
76
15
56
15
6
2
75
1.13
57920--58078
9
16.9
9
70
18
58
15
7
2
74
1.15
63468--63526
30
2.0
30
86
0
82
49
5
13
32
1.64
68877--68936
29
2.1
29
87
6
86
36
11
1
50
1.49
73864--73909
14
3.1
14
79
11
56
50
0
0
50
1.00
73850--73909
30
2.0
31
86
3
86
51
0
0
48
1.00
76527--76565
20
1.9
21
94
5
71
51
12
5
30
1.62

Tables:   1

The End!