Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001517.1 Hibiscus syriacus cultivar Beakdansim tig00002964_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36913

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1259--1327
34
2.0
34
100
0
138
28
2
15
52
1.58
1266--1338
34
2.1
34
90
5
112
30
2
15
52
1.57
1576--1613
17
2.3
17
86
4
51
42
0
2
55
1.14
1567--1613
16
2.9
17
81
6
53
42
2
2
53
1.25
4023--4070
21
2.2
21
85
7
60
58
0
0
41
0.98
4028--4070
21
2.1
22
87
12
65
55
0
0
44
0.99
20724--20767
20
2.1
21
87
4
63
59
2
2
36
1.23
22166--22257
3
30.7
3
86
0
130
60
0
4
34
1.16
22166--22256
27
3.4
27
95
0
164
60
0
4
35
1.17
22510--23275
113
6.8
114
93
1
1215
28
20
13
37
1.90
23899--24403
82
6.2
82
96
1
874
34
20
14
29
1.93
25529--25605
8
9.0
8
74
17
66
2
15
0
81
0.79
25543--25600
11
5.3
11
81
8
73
3
12
0
84
0.74
25528--25599
33
2.2
33
85
5
92
2
15
0
81
0.79
25529--25598
6
9.7
7
75
18
56
2
14
0
82
0.77

Tables:   1

The End!