Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001527.1 Hibiscus syriacus cultivar Beakdansim tig00002993_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67207

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3612--3643
14
2.2
15
94
5
57
6
25
18
50
1.70
5181--5214
17
2.0
17
94
0
59
32
0
5
61
1.20
11357--11400
2
22.0
2
100
0
88
50
0
0
50
1.00
13073--13143
24
2.9
24
93
2
115
42
15
15
26
1.87
13714--13751
15
2.3
16
86
13
51
31
18
0
50
1.47
13799--13848
24
2.1
24
85
7
66
48
0
2
50
1.12
14712--14793
14
5.5
15
75
15
73
43
0
0
56
0.99
14695--14774
43
2.0
39
81
18
94
47
1
0
51
1.08
14909--14962
26
2.0
27
82
7
65
37
12
7
42
1.72
18634--18664
8
3.9
8
100
0
62
77
0
22
0
0.77
18639--18678
13
3.1
12
86
13
53
77
0
22
0
0.77
23868--23906
19
2.1
19
90
9
62
23
15
0
61
1.33
27308--27352
21
2.3
21
85
11
60
62
13
24
0
1.31
28695--28719
11
2.3
11
100
0
50
24
0
0
76
0.80
29482--29511
2
15.5
2
93
6
53
53
0
0
46
1.00
36742--36783
17
2.6
16
84
3
57
64
0
0
35
0.94
36827--36851
13
1.9
13
100
0
50
48
0
28
24
1.52
37813--37870
25
2.3
25
77
8
64
44
1
5
48
1.35
38071--38112
2
21.0
2
100
0
84
50
0
0
50
1.00
40230--40281
3
18.0
3
84
7
54
57
0
5
36
1.23
43863--43912
20
2.5
20
90
0
73
28
14
2
56
1.49
55563--55632
35
2.0
34
88
2
104
28
7
12
51
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57233--57265
16
2.1
16
88
11
50
15
42
0
42
1.46
59335--59396
24
2.6
24
89
0
88
11
12
19
56
1.66
60490--60556
16
4.3
16
86
3
84
10
10
19
59
1.58

Tables:   1

The End!