Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001528.1 Hibiscus syriacus cultivar Beakdansim tig00002994_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71968

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7940--8003
21
3.1
21
95
2
112
54
3
3
39
1.32
7939--8039
10
9.8
10
70
20
66
56
1
2
38
1.26
8097--8223
60
2.1
60
81
11
145
30
15
16
37
1.90
27631--27699
36
1.9
36
87
0
102
50
10
11
27
1.70
29540--29588
23
2.1
23
85
7
64
26
2
14
57
1.48
41608--41666
21
2.8
20
79
7
55
5
16
0
77
0.93
41633--41695
7
9.3
7
79
10
60
0
23
1
74
0.90
41631--41695
34
1.9
34
84
6
87
0
23
1
75
0.89
41633--41689
27
2.2
26
90
3
87
0
22
1
75
0.90
41686--41767
16
5.2
15
69
23
53
7
14
2
75
1.12
41631--41758
6
19.7
6
71
19
55
3
17
2
75
1.06
42463--42491
14
2.1
14
100
0
58
20
17
13
48
1.81
46162--46215
21
2.6
21
78
0
72
18
12
33
35
1.89
46763--46816
2
27.0
2
100
0
108
50
0
0
50
1.00
49336--49364
3
10.0
3
92
7
51
31
0
0
68
0.89
55160--55189
4
7.8
4
92
7
53
73
0
0
26
0.84
55160--55194
11
3.1
11
91
4
52
71
0
2
25
1.00
55639--55844
85
2.4
85
85
4
265
29
20
16
33
1.95
55671--55864
85
2.3
84
81
3
235
34
18
14
31
1.92
58266--58353
39
2.2
40
82
7
101
2
32
6
57
1.37
58265--58339
39
1.9
39
86
5
107
1
30
8
60
1.34
58310--58405
51
1.9
50
89
10
151
3
35
6
55
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67244--67302
27
2.3
26
91
5
93
69
0
20
10
1.17

Tables:   1

The End!