Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001536.1 Hibiscus syriacus cultivar Beakdansim tig00003017_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53898

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
155--207
27
1.9
28
84
3
72
66
3
5
24
1.31
3060--3113
2
27.0
2
96
0
99
50
0
1
48
1.11
4153--4198
15
2.7
18
77
19
62
71
4
2
21
1.14
5409--5445
13
2.8
13
83
0
56
16
45
21
16
1.84
7931--7969
12
3.2
12
79
13
53
28
12
23
35
1.91
7915--8030
24
4.8
24
85
6
146
24
16
18
41
1.90
12119--12165
24
2.0
23
83
8
58
27
2
12
57
1.47
31571--31648
2
39.0
2
100
0
156
50
0
0
50
1.00
31892--31963
18
4.0
18
85
3
83
18
23
30
27
1.97
38513--38539
2
13.5
2
100
0
54
48
0
0
51
1.00
38796--38837
22
1.9
22
95
0
75
23
23
26
26
2.00
41211--41428
31
7.0
31
93
1
348
20
18
22
38
1.93
44355--44384
6
5.0
6
91
0
51
80
0
3
16
0.85
44321--44395
38
2.0
38
84
5
98
74
1
6
17
1.10
44355--44396
18
2.5
16
88
7
57
78
2
4
14
1.01
44379--44466
33
2.5
33
77
15
81
71
3
7
17
1.24
44488--44521
17
1.9
18
88
5
52
79
11
2
5
1.02
44591--44662
8
9.2
8
76
13
53
58
0
1
40
1.07
51413--51550
14
9.3
15
69
17
76
33
0
3
63
1.12

Tables:   1

The End!