Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001539.1 Hibiscus syriacus cultivar Beakdansim tig00003023_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77360

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11472--11500
6
4.8
6
100
0
58
65
0
34
0
0.93
12632--12680
22
2.2
22
92
0
80
53
12
8
26
1.66
14693--14733
15
2.6
16
92
3
66
24
31
14
29
1.95
21015--21053
15
2.6
16
84
12
55
33
5
5
56
1.43
21015--21062
15
3.4
14
80
11
53
29
6
6
58
1.47
21796--21925
62
2.1
62
88
2
190
38
19
14
27
1.91
23612--23693
21
3.9
21
82
9
96
37
18
13
30
1.89
23612--23693
42
2.0
42
90
0
128
37
18
13
30
1.89
23605--23701
42
2.3
42
78
3
115
35
17
14
32
1.90
31000--31054
21
2.6
21
94
0
92
29
25
23
21
1.99
32807--32869
23
2.7
23
80
0
81
17
23
26
31
1.97
36214--36268
21
2.6
21
97
0
101
27
25
25
21
2.00
37614--37650
2
18.5
2
100
0
74
51
0
0
48
1.00
41199--41267
23
3.0
23
78
0
84
17
23
27
31
1.97
42640--42666
6
4.5
6
100
0
54
81
0
0
18
0.69
42670--42696
7
3.9
7
100
0
54
29
0
0
70
0.88
46784--46868
42
2.0
42
93
2
145
9
14
14
62
1.54
76139--76305
83
2.0
83
89
4
257
44
17
17
20
1.87
76353--76378
13
2.0
13
100
0
52
15
38
23
23
1.92

Tables:   1

The End!