Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001548.1 Hibiscus syriacus cultivar Beakdansim tig00003044_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71690

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
426--816
208
1.9
205
96
1
719
30
17
18
33
1.94
1215--1243
15
2.0
15
93
6
51
0
20
3
75
0.94
3925--4028
43
2.3
45
82
11
115
30
1
14
52
1.52
6360--6398
16
2.4
16
86
0
51
71
2
15
10
1.23
6617--6679
21
3.0
20
77
6
63
0
12
9
77
0.98
8186--8289
33
3.1
33
82
9
95
30
36
1
30
1.69
13864--13967
33
3.1
33
82
9
95
30
36
1
30
1.69
16446--16628
91
2.0
91
90
0
285
28
23
28
19
1.98
18413--18442
13
2.4
13
94
5
53
43
0
30
26
1.55
27658--27713
23
2.4
23
88
8
78
62
12
16
8
1.53
30464--30493
13
2.4
13
94
5
53
43
0
30
26
1.55
33267--33315
11
4.2
12
75
19
50
28
2
36
32
1.69
33266--33345
35
2.2
37
88
4
119
28
2
36
32
1.71
33683--33751
19
3.6
19
90
0
102
44
7
15
31
1.74
36841--36878
20
2.0
20
84
5
51
2
15
5
76
1.08
37327--37406
35
2.2
37
91
4
128
27
3
37
31
1.74
40767--40822
9
6.8
8
84
13
69
87
8
3
0
0.65
40767--40813
24
2.0
23
91
4
76
89
6
4
0
0.59
40767--40822
16
3.4
17
85
9
71
87
8
3
0
0.65
40783--40822
8
4.6
9
87
12
57
90
10
0
0
0.47
40767--40829
9
7.3
9
81
12
53
84
11
4
0
0.77
40783--40822
19
2.2
19
90
4
64
90
10
0
0
0.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44909--44945
15
2.4
16
90
4
58
13
10
5
70
1.32
47297--47328
9
3.4
9
91
8
55
87
12
0
0
0.54
47274--47328
17
3.3
16
78
9
58
83
10
5
0
0.79
50749--50802
12
4.7
11
84
6
72
1
11
9
77
1.06
50742--50799
23
2.7
21
84
10
80
1
12
10
75
1.11
50749--50800
23
2.3
23
93
3
88
1
11
7
78
1.02
56575--56616
22
1.9
22
90
0
66
76
9
14
0
1.02
66368--66407
10
3.8
10
81
12
53
0
15
7
77
0.98
66369--66417
22
2.3
20
93
6
80
0
10
8
81
0.87
66369--66417
11
4.6
11
87
12
68
0
10
8
81
0.87
67473--67532
11
5.7
10
81
13
59
78
5
13
3
1.04

Tables:   1

The End!