Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001549.1 Hibiscus syriacus cultivar Beakdansim tig00003045_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60982

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3276--4285
259
3.9
259
86
1
1276
35
17
15
30
1.92
3808--3908
42
2.4
42
83
1
114
35
21
18
23
1.96
26986--27017
15
2.1
15
94
0
55
34
6
6
53
1.51
27629--27653
8
3.1
8
100
0
50
48
0
0
52
1.00
28796--28833
4
9.8
4
88
5
60
23
0
2
73
0.95
28873--28913
15
2.8
16
82
14
52
24
2
0
73
0.96
29172--29214
2
21.5
2
100
0
86
48
0
0
51
1.00
29318--29370
27
2.0
27
92
0
88
20
5
1
71
1.16
37854--37899
21
2.2
21
96
0
83
43
17
17
21
1.88
37860--37905
21
2.4
19
85
10
58
39
19
17
23
1.92
40518--40548
10
3.1
10
100
0
62
87
0
12
0
0.55
43202--43326
57
2.2
56
81
9
155
29
2
4
64
1.25
43285--43341
3
17.7
3
92
3
69
36
1
0
61
1.07
43340--43377
14
2.8
14
84
15
53
10
7
5
76
1.15
43353--43413
18
3.4
18
79
16
56
13
4
8
73
1.22
43721--43758
17
2.2
17
90
0
58
18
7
2
71
1.23
44415--44459
22
2.0
22
82
0
54
33
28
15
22
1.95
58413--58453
20
2.1
19
86
9
55
29
17
14
39
1.89

Tables:   1

The End!