Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000155.1 Hibiscus syriacus cultivar Beakdansim tig00000275_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88843

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3445--3510
32
2.1
32
94
0
114
45
6
6
42
1.53
4703--4949
68
3.6
68
97
0
431
15
14
17
52
1.75
6300--6573
21
13.4
21
78
6
276
22
21
23
32
1.98
6285--6573
61
4.7
61
96
0
515
22
21
23
32
1.98
6666--6701
6
6.0
6
100
0
72
33
16
0
50
1.46
7047--7102
19
3.0
19
92
2
87
35
28
3
32
1.74
23201--23233
17
2.0
17
88
5
50
60
21
12
6
1.53
34673--34722
19
2.6
19
74
0
55
16
0
10
74
1.08
43531--43599
29
2.4
30
90
7
115
42
18
5
33
1.75
43607--43667
17
3.3
18
75
20
63
18
21
42
18
1.89
43600--43665
22
2.9
22
86
4
78
18
21
42
18
1.89
44494--45012
82
6.4
82
87
2
746
35
15
14
34
1.89
44494--45012
158
3.2
157
87
5
702
35
15
14
34
1.89
44502--44980
240
2.0
239
90
0
742
34
16
13
34
1.89
45784--45957
64
2.7
64
81
7
194
32
20
21
25
1.97
46393--46738
31
11.2
31
94
0
584
39
11
15
34
1.83
46614--46667
16
3.4
16
67
23
51
38
12
16
31
1.87
51092--51124
16
2.1
16
88
11
50
66
0
0
33
0.92
60499--60546
23
2.1
23
88
0
69
35
12
18
33
1.89
60884--60922
20
2.0
20
89
0
60
48
10
15
25
1.76
60920--60973
23
2.5
20
75
18
54
42
18
1
37
1.61
60935--60997
23
2.7
23
90
0
90
38
19
6
36
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61350--61403
23
2.5
20
75
18
54
42
18
1
37
1.61
61365--61422
23
2.5
23
91
0
89
37
18
6
36
1.78
63913--64958
184
5.7
184
97
0
1932
34
15
14
35
1.89
66323--66373
3
17.0
3
83
0
66
25
33
3
37
1.74
66323--66385
12
5.2
12
90
0
81
23
33
6
36
1.80
66327--66388
18
3.4
18
88
0
88
20
33
6
38
1.79
66327--66388
6
10.3
6
83
0
61
20
33
6
38
1.79
67850--68672
199
4.1
200
95
0
1451
33
15
14
36
1.88
68761--68816
19
2.9
19
97
0
103
53
10
3
32
1.53
70598--70663
33
2.0
33
87
0
96
24
45
1
28
1.62
72953--72999
20
2.4
19
79
10
58
19
17
8
55
1.67
73120--73166
20
2.3
20
89
10
78
17
17
10
55
1.69
73229--73670
223
2.0
223
93
1
762
39
7
7
45
1.61
76885--76916
15
2.1
15
94
0
55
31
0
43
25
1.55
80161--80209
20
2.5
20
79
0
53
63
0
4
32
1.13
85124--85151
2
14.0
2
100
0
56
50
0
0
50
1.00
88663--88707
21
2.1
21
84
8
56
35
28
22
13
1.92

Tables:   1

The End!