Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001552.1 Hibiscus syriacus cultivar Beakdansim tig00003054_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59447

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1789--1838
17
2.9
17
80
11
57
82
12
6
0
0.85
1788--1831
12
3.6
12
87
6
61
84
11
4
0
0.77
9591--9619
15
2.0
15
93
6
51
0
20
3
75
0.94
9614--9672
29
2.1
27
84
6
73
10
15
13
61
1.57
20513--20614
36
2.9
36
92
1
170
28
4
35
31
1.78
24998--25113
36
3.2
36
91
1
189
28
3
37
30
1.74
30681--30761
10
7.7
10
69
14
56
3
13
3
79
1.01
30714--30760
16
2.8
17
81
15
53
4
14
4
76
1.09
30683--30761
37
2.2
36
80
13
90
3
12
3
79
1.00
31078--31117
12
3.2
12
82
3
53
32
2
32
32
1.71
40293--40335
11
3.7
11
82
11
50
74
2
23
0
0.93
40280--40335
24
2.3
23
80
14
69
76
1
21
0
0.87
40281--40335
19
2.9
19
84
12
78
76
1
21
0
0.88
49117--49167
19
2.6
20
87
3
68
45
5
13
35
1.68
49955--50003
25
1.9
25
83
4
62
44
6
14
34
1.70
52577--52631
23
2.3
25
81
6
69
61
10
18
9
1.54

Tables:   1

The End!