Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001554.1 Hibiscus syriacus cultivar Beakdansim tig00003056_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83340

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4372--4743
181
2.0
185
87
11
543
32
20
15
31
1.94
4554--5509
256
3.8
258
89
6
1455
31
20
17
30
1.95
1--4557
243
18.7
259
88
10
6657
31
20
18
29
1.96
5513--67389
261
242.3
259
90
5
81622
31
20
17
30
1.96
7997--8076
41
2.0
41
92
0
133
28
22
18
30
1.98
9557--9640
42
2.0
42
86
4
116
36
17
21
23
1.94
16847--16907
21
2.9
22
66
14
56
34
19
22
22
1.97
29134--29241
42
2.6
40
76
12
110
29
20
23
26
1.99
36834--36928
38
2.4
41
79
11
119
31
22
22
24
1.98
38658--39056
198
2.0
198
86
5
567
33
19
14
31
1.92
38858--83340
254
175.0
255
89
7
60729
31
20
18
29
1.96
67187--67589
198
1.9
199
88
10
596
32
18
19
29
1.96
67431--83340
253
63.3
259
92
6
26217
31
19
18
29
1.96
81288--81373
41
2.2
39
80
12
97
31
19
24
24
1.98

Tables:   1

The End!