Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001560.1 Hibiscus syriacus cultivar Beakdansim tig00003083_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44755

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11552--11611
29
2.0
30
87
3
86
58
10
16
15
1.63
16063--16395
78
4.3
78
90
0
504
40
17
18
23
1.91
16792--21410
823
5.7
815
81
7
5458
33
13
16
36
1.87
19192--21410
824
2.7
809
85
3
2959
33
13
16
36
1.88
23074--25520
818
3.0
810
86
5
3388
32
12
17
37
1.87
28323--28574
131
1.9
131
85
1
344
39
18
8
33
1.82
30504--30548
11
4.3
11
81
18
60
2
0
33
64
1.06
30511--30556
19
2.4
19
96
0
83
0
2
36
60
1.09
30784--30817
13
2.5
13
90
4
50
73
0
0
26
0.83
30793--30903
3
36.3
3
90
5
134
61
0
4
33
1.22
32714--32765
16
3.2
16
91
5
86
7
7
0
84
0.77
37872--37913
18
2.3
18
95
0
75
11
28
7
52
1.64
39400--39428
14
2.1
14
100
0
58
31
27
20
20
1.98
42012--42036
13
1.9
13
100
0
50
72
0
12
16
1.13

Tables:   1

The End!