Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001566.1 Hibiscus syriacus cultivar Beakdansim tig00003100_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80989

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2432--2457
2
13.0
2
100
0
52
50
0
50
0
1.00
3308--3363
19
2.9
19
91
0
94
55
0
1
42
1.10
5017--5152
69
1.9
70
83
5
177
38
14
2
44
1.61
14655--14705
20
2.4
22
78
18
63
37
5
7
49
1.56
17556--17648
14
6.5
14
87
4
141
16
34
13
35
1.88
21574--21609
16
2.2
16
100
0
72
38
0
30
30
1.58
25491--25549
2
29.5
2
100
0
118
50
0
0
49
1.00
27298--27341
2
22.0
2
100
0
88
50
0
50
0
1.00
27726--27755
2
15.5
2
93
6
53
50
0
0
50
1.00
47933--47970
2
19.0
2
100
0
76
50
0
0
50
1.00
49485--49620
68
2.0
68
94
0
236
24
21
25
28
1.99
51276--51365
35
2.6
35
83
3
101
26
12
13
47
1.78
77788--77829
18
2.3
18
95
0
75
38
40
11
9
1.75
78027--78070
23
2.0
22
82
13
54
40
0
0
59
0.98
80065--80094
10
3.0
10
90
0
51
30
36
0
33
1.58

Tables:   1

The End!