Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001588.1 Hibiscus syriacus cultivar Beakdansim tig00003168_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84376

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4550--4583
17
2.1
16
88
5
50
14
8
0
76
1.01
21422--21789
131
2.8
130
84
2
450
39
15
11
33
1.83
25095--25195
22
4.8
22
80
4
120
19
23
28
27
1.99
26253--27111
134
6.4
133
81
5
903
31
16
20
31
1.94
33738--34104
131
2.8
131
82
3
418
40
15
11
31
1.84
35289--35515
110
2.1
110
97
0
427
17
35
22
24
1.95
37537--37587
23
2.2
24
79
13
61
25
41
0
33
1.56
37841--37892
25
2.1
25
82
10
63
26
1
3
67
1.18
39972--40027
24
2.3
23
79
8
67
23
0
7
69
1.12
44457--44601
64
2.2
64
81
6
159
26
15
24
33
1.95
47478--48061
55
10.9
55
88
4
693
28
26
16
27
1.97
47478--47995
161
3.2
161
89
2
761
28
26
16
27
1.97
49385--49437
20
2.8
18
83
16
63
7
20
0
71
1.10
49395--49481
40
2.1
42
82
16
103
10
18
0
71
1.14
62738--62769
15
2.1
15
100
0
64
18
40
6
34
1.76
66064--66106
18
2.4
18
92
3
70
39
0
0
60
0.97
80350--80378
15
1.9
15
100
0
58
44
6
20
27
1.77
81189--81228
14
2.8
14
84
3
53
45
12
32
10
1.75

Tables:   1

The End!