Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01001610.1 Hibiscus syriacus cultivar Beakdansim tig00003194_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 256671
ACGTcount: A:0.33, C:0.19, G:0.16, T:0.32
Found at i:12 original size:7 final size:7
Alignment explanation
Indices: 1--13227 Score: 17589
Period size: 7 Copynumber: 1926.1 Consensus size: 7
1 CTAAACC
1 CTAAACC
8 CTAAACCC
1 CTAAA-CC
*
16 CGAAACC
1 CTAAACC
*
23 CGAAACC
1 CTAAACC
30 CTAAACC
1 CTAAACC
37 CTAAA-C
1 CTAAACC
*
43 CGAAACC
1 CTAAACC
50 CT-AACC
1 CTAAACC
56 CTAAACC
1 CTAAACC
63 CTAAACC
1 CTAAACC
70 CTAAACC
1 CTAAACC
*
77 CTGAACC
1 CTAAACC
84 CTAAACC
1 CTAAACC
91 CTAAACC
1 CTAAACC
98 CTAAACC
1 CTAAACC
105 CTAAA-C
1 CTAAACC
111 CTAAACC
1 CTAAACC
*
118 CGAAACC
1 CTAAACC
125 CTAAACC
1 CTAAACC
132 CTAAACC
1 CTAAACC
139 CTAAACC
1 CTAAACC
146 CTAAACC
1 CTAAACC
153 CTAAACC
1 CTAAACC
160 CTAAACC
1 CTAAACC
167 CTAAACC
1 CTAAACC
174 CTAAACC
1 CTAAACC
181 CTAAACC
1 CTAAACC
188 CTAAACC
1 CTAAACC
195 CTAAACC
1 CTAAACC
202 CTAAACC
1 CTAAACC
209 CTAAACC
1 CTAAACC
216 CTAAACC
1 CTAAACC
223 CTAAACC
1 CTAAACC
230 CTAAACC
1 CTAAACC
237 C--AACC
1 CTAAACC
242 CTAAACC
1 CTAAACC
249 CTAAACC
1 CTAAACC
256 CTAAACC
1 CTAAACC
263 CTAAACC
1 CTAAACC
270 CTAAACC
1 CTAAACC
277 CT-AACC
1 CTAAACC
*
283 CGAAACC
1 CTAAACC
290 CTAAAACC
1 CT-AAACC
298 CT-AACC
1 CTAAACC
304 CTAAA-C
1 CTAAACC
310 CTAAA-C
1 CTAAACC
316 CTAAACC
1 CTAAACC
323 CTAAACC
1 CTAAACC
330 CTAAACC
1 CTAAACC
337 CTAAA-C
1 CTAAACC
343 CTAAACC
1 CTAAACC
350 CTAAACC
1 CTAAACC
357 CTAAACC
1 CTAAACC
364 CTAAACC
1 CTAAACC
371 CTAAACC
1 CTAAACC
378 CTAAACC
1 CTAAACC
385 CTAAACC
1 CTAAACC
392 CTAAACC
1 CTAAACC
399 CT-AACC
1 CTAAACC
405 CTAAACC
1 CTAAACC
412 CTAAA-C
1 CTAAACC
*
418 CGAAA-C
1 CTAAACC
424 CTAAACC
1 CTAAACC
431 CTAAACC
1 CTAAACC
438 CT-AACC
1 CTAAACC
444 CTAAACC
1 CTAAACC
451 CTAAACC
1 CTAAACC
458 CTAAACC
1 CTAAACC
465 CTAAAACC
1 CT-AAACC
473 CT-AA-C
1 CTAAACC
478 CTAAACC
1 CTAAACC
485 CTAAACC
1 CTAAACC
492 CTAAACC
1 CTAAACC
499 CTAAACC
1 CTAAACC
506 CT-AACC
1 CTAAACC
512 CTAAAACC
1 CT-AAACC
520 CTAAAAAACC
1 CT---AAACC
530 CTAAACC
1 CTAAACC
537 C-AAACC
1 CTAAACC
543 CTAAACC
1 CTAAACC
550 CTAAACC
1 CTAAACC
557 CTAAACC
1 CTAAACC
564 CTAAACC
1 CTAAACC
571 CTAAA-C
1 CTAAACC
577 CTAAACC
1 CTAAACC
584 CTAAACC
1 CTAAACC
591 CTAAACC
1 CTAAACC
598 CTAAACC
1 CTAAACC
605 CTAAACC
1 CTAAACC
612 CT-AACC
1 CTAAACC
618 CTAAACC
1 CTAAACC
625 CTAAACC
1 CTAAACC
632 CTAAACC
1 CTAAACC
639 CTAAACC
1 CTAAACC
646 CTAAACC
1 CTAAACC
653 CTAAACC
1 CTAAACC
660 CT-AACC
1 CTAAACC
666 CTAAACC
1 CTAAACC
673 CTAAACC
1 CTAAACC
680 CTAAA-C
1 CTAAACC
686 CTAAACC
1 CTAAACC
693 CTAAACC
1 CTAAACC
*
700 CGAAACC
1 CTAAACC
707 CTAAACCCC
1 CTAAA--CC
716 CTAAACC
1 CTAAACC
723 CTAAACC
1 CTAAACC
730 CTAAACC
1 CTAAACC
737 CTAAACC
1 CTAAACC
744 CTAAACC
1 CTAAACC
751 CTAAACC
1 CTAAACC
758 CTAAACC
1 CTAAACC
765 CTAAACC
1 CTAAACC
772 CTAAACC
1 CTAAACC
779 CTAAACC
1 CTAAACC
786 C-AAACC
1 CTAAACC
792 CTAAACC
1 CTAAACC
*
799 CGAAACC
1 CTAAACC
806 CTAAACC
1 CTAAACC
813 CTAAACC
1 CTAAACC
820 CTAAACC
1 CTAAACC
827 CTAAACC
1 CTAAACC
834 CTAAACC
1 CTAAACC
841 CTAAACC
1 CTAAACC
848 CT-AACC
1 CTAAACC
854 CTAAACC
1 CTAAACC
861 CTAAACC
1 CTAAACC
868 CT-AACC
1 CTAAACC
874 CTAAACC
1 CTAAACC
881 CTAAACC
1 CTAAACC
888 CTAAA-C
1 CTAAACC
894 CTAAACC
1 CTAAACC
901 CTAAA-C
1 CTAAACC
907 CTAAACC
1 CTAAACC
914 CTAAACC
1 CTAAACC
921 CTAAA-C
1 CTAAACC
927 CT-AACC
1 CTAAACC
933 CTAAACC
1 CTAAACC
*
940 CGAAA-C
1 CTAAACC
946 CTAAACC
1 CTAAACC
953 CTAAACC
1 CTAAACC
960 CTAAACC
1 CTAAACC
967 CTAAACC
1 CTAAACC
974 CTAAACC
1 CTAAACC
981 CTAAACC
1 CTAAACC
988 CTAAACC
1 CTAAACC
995 CTAAACC
1 CTAAACC
1002 CTAAAACC
1 CT-AAACC
1010 CTAAACC
1 CTAAACC
1017 CTAAACC
1 CTAAACC
1024 CT-AACC
1 CTAAACC
1030 CTAAA-C
1 CTAAACC
1036 CTAAACC
1 CTAAACC
1043 CTAAACC
1 CTAAACC
1050 CTAAACC
1 CTAAACC
1057 CTAAACC
1 CTAAACC
1064 CTAAA-C
1 CTAAACC
1070 CTAAACC
1 CTAAACC
1077 CT-AACC
1 CTAAACC
*
1083 CGAAA-C
1 CTAAACC
*
1089 CTAACCTCC
1 CTAA--ACC
1098 CTAAACC
1 CTAAACC
1105 CTAAACC
1 CTAAACC
1112 CTAAACC
1 CTAAACC
1119 CTAAACC
1 CTAAACC
1126 CTAAACC
1 CTAAACC
1133 CT-AA-C
1 CTAAACC
1138 CTAAACC
1 CTAAACC
1145 CT-AACC
1 CTAAACC
1151 CTAAACC
1 CTAAACC
1158 CT-AA-C
1 CTAAACC
1163 CTAAACC
1 CTAAACC
1170 CTAAACC
1 CTAAACC
1177 CTAAACC
1 CTAAACC
1184 CTAAACC
1 CTAAACC
1191 CTAAACC
1 CTAAACC
1198 CTAAACC
1 CTAAACC
1205 CTAAACC
1 CTAAACC
1212 CTAAACC
1 CTAAACC
1219 CTAAACC
1 CTAAACC
1226 CTAAACC
1 CTAAACC
1233 CTAAACC
1 CTAAACC
1240 CTAAACC
1 CTAAACC
1247 CTAAACC
1 CTAAACC
1254 CTAAACC
1 CTAAACC
1261 CTAAACC
1 CTAAACC
1268 CT-AACC
1 CTAAACC
1274 CTAAACC
1 CTAAACC
1281 CTAAACC
1 CTAAACC
*
1288 CAAAACC
1 CTAAACC
1295 CTAAACC
1 CTAAACC
1302 CT-AACC
1 CTAAACC
1308 CTAAACC
1 CTAAACC
1315 C-AAACC
1 CTAAACC
1321 CTAAACC
1 CTAAACC
1328 CTAAA-C
1 CTAAACC
1334 CTAAACC
1 CTAAACC
1341 CTAAACC
1 CTAAACC
1348 CTAAACC
1 CTAAACC
1355 CTAAACC
1 CTAAACC
1362 CTAAACC
1 CTAAACC
1369 CT-AACC
1 CTAAACC
1375 CTAAACC
1 CTAAACC
1382 CTAAACC
1 CTAAACC
1389 CTAAACC
1 CTAAACC
1396 CTAAACC
1 CTAAACC
1403 CT-AA-C
1 CTAAACC
1408 CTAAACC
1 CTAAACC
1415 CTAAACC
1 CTAAACC
1422 CTAAACC
1 CTAAACC
1429 CTAAACC
1 CTAAACC
1436 CTAAACC
1 CTAAACC
1443 CTAAACC
1 CTAAACC
1450 CTAAACC
1 CTAAACC
1457 CT-AACC
1 CTAAACC
1463 CTAAACC
1 CTAAACC
1470 CTAAACC
1 CTAAACC
1477 CTAAACC
1 CTAAACC
1484 CTAAACC
1 CTAAACC
1491 CTAAACC
1 CTAAACC
*
1498 CAAAACC
1 CTAAACC
1505 CTAAACC
1 CTAAACC
1512 CTAAACC
1 CTAAACC
1519 CTAAA-C
1 CTAAACC
1525 CTAAACC
1 CTAAACC
1532 CTAAACC
1 CTAAACC
1539 CTAAACC
1 CTAAACC
1546 CTAAACC
1 CTAAACC
1553 CTAAACC
1 CTAAACC
1560 CTAAACC
1 CTAAACC
1567 CTAAA-C
1 CTAAACC
1573 CTAAACC
1 CTAAACC
1580 CTAAACC
1 CTAAACC
1587 CTAAACC
1 CTAAACC
1594 CTAAACC
1 CTAAACC
1601 C-AAACC
1 CTAAACC
1607 CTAAACC
1 CTAAACC
1614 CT-AACC
1 CTAAACC
1620 CTAAACC
1 CTAAACC
1627 C-AAACC
1 CTAAACC
1633 CTAAA-C
1 CTAAACC
1639 CTAAA-C
1 CTAAACC
1645 CTAAACC
1 CTAAACC
1652 CTAAACC
1 CTAAACC
1659 CTAAACC
1 CTAAACC
1666 CTAAACC
1 CTAAACC
1673 CTAAACC
1 CTAAACC
*
1680 CGAAACC
1 CTAAACC
1687 CTAAACC
1 CTAAACC
1694 CTAAACC
1 CTAAACC
*
1701 CGAAACC
1 CTAAACC
1708 CT-AACC
1 CTAAACC
1714 CTAAA-C
1 CTAAACC
1720 CTAAACC
1 CTAAACC
1727 CTAAACC
1 CTAAACC
1734 CT-AACC
1 CTAAACC
1740 CTAAACC
1 CTAAACC
1747 CTAAACC
1 CTAAACC
1754 CTAAACC
1 CTAAACC
1761 CT-AACC
1 CTAAACC
1767 CTAAACC
1 CTAAACC
1774 CTAAACC
1 CTAAACC
1781 CTAAACC
1 CTAAACC
1788 CT-AACC
1 CTAAACC
1794 CTAAACC
1 CTAAACC
1801 CTAAA-C
1 CTAAACC
1807 CTAAACC
1 CTAAACC
1814 CTAAACC
1 CTAAACC
1821 CTAAACC
1 CTAAACC
1828 C---ACC
1 CTAAACC
1832 CTAAACC
1 CTAAACC
1839 CTAAACC
1 CTAAACC
1846 CTAAACC
1 CTAAACC
1853 CTAAA-C
1 CTAAACC
1859 CTAAACC
1 CTAAACC
1866 CTAAACC
1 CTAAACC
1873 CTAAA-C
1 CTAAACC
1879 CTAAACC
1 CTAAACC
1886 CT-AACC
1 CTAAACC
1892 CTAAA-C
1 CTAAACC
1898 CTAAACC
1 CTAAACC
1905 C-AAACC
1 CTAAACC
*
1911 CGAAACC
1 CTAAACC
1918 CTAAA-C
1 CTAAACC
1924 CTAAACC
1 CTAAACC
1931 CTAAA-C
1 CTAAACC
1937 CTAAACC
1 CTAAACC
1944 CTAAACC
1 CTAAACC
1951 CTAAACC
1 CTAAACC
1958 CTAAACC
1 CTAAACC
1965 CTAAACC
1 CTAAACC
1972 CT-AACC
1 CTAAACC
1978 C-AAACC
1 CTAAACC
1984 CTAAACC
1 CTAAACC
1991 CTAAACC
1 CTAAACC
1998 CTAAA-C
1 CTAAACC
2004 CTAAACC
1 CTAAACC
2011 C-AAACC
1 CTAAACC
2017 CTAAACC
1 CTAAACC
2024 CTAAACC
1 CTAAACC
2031 CTAAACC
1 CTAAACC
2038 CTAAACC
1 CTAAACC
2045 CT-AACC
1 CTAAACC
2051 CTAAACC
1 CTAAACC
2058 CTAAACC
1 CTAAACC
2065 CTAAACC
1 CTAAACC
2072 CTAAACC
1 CTAAACC
2079 CTAAACC
1 CTAAACC
2086 CTAAACC
1 CTAAACC
2093 CTAAACC
1 CTAAACC
2100 CTAAACC
1 CTAAACC
2107 CTAAACC
1 CTAAACC
2114 CTAAA-C
1 CTAAACC
2120 CT-AACC
1 CTAAACC
2126 CTAAACC
1 CTAAACC
2133 CTAAACC
1 CTAAACC
2140 CTAAACC
1 CTAAACC
2147 CTAAACC
1 CTAAACC
2154 CTAAACC
1 CTAAACC
2161 CT-AACC
1 CTAAACC
2167 CTAAACC
1 CTAAACC
2174 CTAAACC
1 CTAAACC
2181 CTAAAACC
1 CT-AAACC
2189 CTAAACC
1 CTAAACC
2196 CTAAACC
1 CTAAACC
2203 CTAAA-C
1 CTAAACC
2209 CTAAACC
1 CTAAACC
2216 CT-AACC
1 CTAAACC
2222 CTAAA-C
1 CTAAACC
2228 CTAAACC
1 CTAAACC
2235 CTAAACC
1 CTAAACC
2242 CTAAACC
1 CTAAACC
2249 CTAAACC
1 CTAAACC
2256 CTAAACC
1 CTAAACC
2263 CT-AACC
1 CTAAACC
2269 CTAAACC
1 CTAAACC
2276 CTAAACC
1 CTAAACC
2283 CTAAACC
1 CTAAACC
2290 CTAAAACC
1 CT-AAACC
2298 CTAAACC
1 CTAAACC
2305 CTAAACC
1 CTAAACC
2312 CTAAACC
1 CTAAACC
2319 CTAAACC
1 CTAAACC
2326 CTAAACC
1 CTAAACC
2333 CT-AACC
1 CTAAACC
2339 CTAAA-C
1 CTAAACC
2345 CTAAACC
1 CTAAACC
2352 CTAAACC
1 CTAAACC
2359 CTAAA-C
1 CTAAACC
2365 CTAAACC
1 CTAAACC
2372 CT-AA-C
1 CTAAACC
2377 CTAAACC
1 CTAAACC
2384 CTAAACC
1 CTAAACC
2391 CTAAACC
1 CTAAACC
2398 CTAAACCCC
1 CTAAA--CC
2407 CTAAACC
1 CTAAACC
2414 CTAAAACC
1 CT-AAACC
2422 CTAAACCC
1 CTAAA-CC
2430 CTAAACC
1 CTAAACC
2437 CT-AACC
1 CTAAACC
2443 CTAAACC
1 CTAAACC
2450 CTAAACC
1 CTAAACC
2457 CTAAACC
1 CTAAACC
2464 CTAAACC
1 CTAAACC
2471 CT-AACC
1 CTAAACC
2477 CTAAACC
1 CTAAACC
2484 CTAAACC
1 CTAAACC
2491 CTAAACC
1 CTAAACC
2498 CTAAA--
1 CTAAACC
2503 CTAAACC
1 CTAAACC
2510 CTAAACC
1 CTAAACC
2517 CTAAACC
1 CTAAACC
2524 CTAAACC
1 CTAAACC
2531 CT-AACC
1 CTAAACC
2537 CTAAACC
1 CTAAACC
2544 CT-AACC
1 CTAAACC
2550 CTAAACC
1 CTAAACC
2557 CTAAACC
1 CTAAACC
2564 CTAAACC
1 CTAAACC
2571 CTAAACC
1 CTAAACC
2578 CTAAA-C
1 CTAAACC
2584 CTAAACC
1 CTAAACC
*
2591 CT--CCC
1 CTAAACC
2596 CTAAACC
1 CTAAACC
2603 CTAAACC
1 CTAAACC
2610 CT-AACC
1 CTAAACC
2616 CTAAACC
1 CTAAACC
2623 CTAAACC
1 CTAAACC
2630 CTAAACC
1 CTAAACC
2637 CTAAA-C
1 CTAAACC
2643 CTAAACC
1 CTAAACC
2650 CTAAACC
1 CTAAACC
2657 CTAAACC
1 CTAAACC
2664 CTAAA-C
1 CTAAACC
2670 CTAAA-C
1 CTAAACC
2676 CTAAACC
1 CTAAACC
2683 CTAAACC
1 CTAAACC
2690 CTAAACC
1 CTAAACC
2697 CTAAACC
1 CTAAACC
2704 CTAAACC
1 CTAAACC
2711 CTAAACC
1 CTAAACC
2718 CTAAA-C
1 CTAAACC
2724 CTAAACC
1 CTAAACC
2731 CTAAA-C
1 CTAAACC
2737 CTAAACC
1 CTAAACC
2744 CTAAACC
1 CTAAACC
2751 CTAAACC
1 CTAAACC
2758 CTAAACC
1 CTAAACC
2765 CTAAACC
1 CTAAACC
2772 CTAAACC
1 CTAAACC
2779 CTAAACC
1 CTAAACC
2786 CTAAACC
1 CTAAACC
2793 CTAAACC
1 CTAAACC
2800 CTAAACC
1 CTAAACC
2807 CTAAACC
1 CTAAACC
2814 CTAAA-C
1 CTAAACC
2820 CT-AACC
1 CTAAACC
2826 CTAAACC
1 CTAAACC
2833 CTAAACC
1 CTAAACC
2840 CTAAACC
1 CTAAACC
2847 CT--ACC
1 CTAAACC
2852 CTAAACC
1 CTAAACC
2859 CT-AACC
1 CTAAACC
2865 CTAAAACC
1 CT-AAACC
2873 CTAAA-C
1 CTAAACC
2879 CTAAACC
1 CTAAACC
2886 CTAAA-C
1 CTAAACC
2892 CTAAACC
1 CTAAACC
*
2899 CAAAACC
1 CTAAACC
2906 CTAAACC
1 CTAAACC
2913 CTAAACC
1 CTAAACC
2920 CTAAA-C
1 CTAAACC
2926 CTAAA-C
1 CTAAACC
2932 CT-AACC
1 CTAAACC
2938 CTAAACCC
1 CTAAA-CC
2946 CTAAA-C
1 CTAAACC
2952 CTAAACC
1 CTAAACC
2959 CTAAA-C
1 CTAAACC
2965 CT-AACC
1 CTAAACC
2971 CTAAACC
1 CTAAACC
2978 CTAAACC
1 CTAAACC
2985 CTAAA-C
1 CTAAACC
2991 CTAAACC
1 CTAAACC
2998 CTAAACC
1 CTAAACC
3005 CTAAAACC
1 CT-AAACC
3013 CTAAACC
1 CTAAACC
3020 CTAAACCC
1 CTAAA-CC
3028 CTAAACC
1 CTAAACC
3035 CTAAACC
1 CTAAACC
3042 CTAAACC
1 CTAAACC
3049 CTAAACC
1 CTAAACC
3056 CT-AACC
1 CTAAACC
3062 CTAAACC
1 CTAAACC
3069 CTAAACC
1 CTAAACC
3076 CTAAACC
1 CTAAACC
3083 CTAAACC
1 CTAAACC
3090 CTAAACC
1 CTAAACC
3097 CT-AACC
1 CTAAACC
3103 CTAAACC
1 CTAAACC
3110 CTAAACC
1 CTAAACC
3117 CTAAACC
1 CTAAACC
3124 CTAAACC
1 CTAAACC
3131 CTAAACC
1 CTAAACC
3138 CTAAACC
1 CTAAACC
3145 CTAAACC
1 CTAAACC
3152 CTAAACC
1 CTAAACC
3159 CTAAACC
1 CTAAACC
3166 CTAAAACC
1 CT-AAACC
3174 CTAAACC
1 CTAAACC
3181 CTAAACC
1 CTAAACC
3188 CTAAACC
1 CTAAACC
3195 CTAAACC
1 CTAAACC
3202 CTAAACC
1 CTAAACC
3209 CTAAACC
1 CTAAACC
3216 CT-AACC
1 CTAAACC
3222 CTAAACC
1 CTAAACC
3229 CTAAACC
1 CTAAACC
3236 CTAAACC
1 CTAAACC
3243 CT-AACC
1 CTAAACC
3249 CTAAACC
1 CTAAACC
3256 CT-AACC
1 CTAAACC
3262 CTAAACC
1 CTAAACC
3269 CTAAA-C
1 CTAAACC
3275 CTAAACC
1 CTAAACC
3282 CTAAACC
1 CTAAACC
3289 CTAAACC
1 CTAAACC
3296 CTAAACC
1 CTAAACC
3303 CTAAACC
1 CTAAACC
3310 CTAAACC
1 CTAAACC
3317 CTAAACC
1 CTAAACC
3324 CTAAACC
1 CTAAACC
3331 CT-AACC
1 CTAAACC
3337 CTAAACC
1 CTAAACC
3344 CT-AACC
1 CTAAACC
3350 CTAAACC
1 CTAAACC
3357 CTAAACC
1 CTAAACC
3364 CTAAACC
1 CTAAACC
3371 CTAAACC
1 CTAAACC
3378 CTAAA-C
1 CTAAACC
3384 CTAAACC
1 CTAAACC
3391 CTAAACC
1 CTAAACC
3398 CTAAA-C
1 CTAAACC
3404 CTAAACC
1 CTAAACC
3411 CTAAA--
1 CTAAACC
3416 CTAAACC
1 CTAAACC
3423 CTAAACC
1 CTAAACC
3430 CTAAAAACC
1 CT--AAACC
3439 CTAAACC
1 CTAAACC
3446 CTAAACC
1 CTAAACC
3453 CTAAACC
1 CTAAACC
3460 CTAAACC
1 CTAAACC
3467 CTAAACC
1 CTAAACC
3474 CTAAAACC
1 CT-AAACC
3482 CTAAACC
1 CTAAACC
3489 CTAAACC
1 CTAAACC
3496 CTAAA-C
1 CTAAACC
3502 CTAAACC
1 CTAAACC
3509 CT-AACC
1 CTAAACC
3515 CT-AACC
1 CTAAACC
3521 CTAAACC
1 CTAAACC
3528 CTAAACC
1 CTAAACC
3535 CTAAACC
1 CTAAACC
3542 CTAAACC
1 CTAAACC
3549 CT-AACC
1 CTAAACC
3555 CTAAACC
1 CTAAACC
3562 CTAAACC
1 CTAAACC
3569 CTAAACC
1 CTAAACC
3576 CTAAACC
1 CTAAACC
3583 CTAAA-C
1 CTAAACC
3589 C-AAACC
1 CTAAACC
3595 CTAAACC
1 CTAAACC
3602 CTAAACC
1 CTAAACC
3609 CTAAACC
1 CTAAACC
3616 CTAAACC
1 CTAAACC
3623 CTAAACC
1 CTAAACC
3630 CTAAACC
1 CTAAACC
3637 CTAAACC
1 CTAAACC
3644 CTAAACC
1 CTAAACC
3651 CTAAACC
1 CTAAACC
3658 CTAAACC
1 CTAAACC
*
3665 CTAACCC
1 CTAAACC
3672 CTAAACC
1 CTAAACC
3679 CTAAACC
1 CTAAACC
3686 CT-AA-C
1 CTAAACC
3691 CTAAACC
1 CTAAACC
3698 CTAAACC
1 CTAAACC
3705 CTAAA-C
1 CTAAACC
3711 CT-AACC
1 CTAAACC
3717 CTAAACC
1 CTAAACC
3724 CTAAACC
1 CTAAACC
3731 CTAAACC
1 CTAAACC
3738 CTAAACC
1 CTAAACC
3745 CTAAACC
1 CTAAACC
3752 CTAAACC
1 CTAAACC
3759 CTAAACC
1 CTAAACC
3766 CTAAACC
1 CTAAACC
3773 CTAAACC
1 CTAAACC
3780 CTAAA-C
1 CTAAACC
3786 CTAAACC
1 CTAAACC
3793 CTAAACC
1 CTAAACC
3800 CT-AACC
1 CTAAACC
3806 CT-AACC
1 CTAAACC
3812 CTAAACC
1 CTAAACC
3819 CTAAACC
1 CTAAACC
3826 CTAAACC
1 CTAAACC
3833 CTAAACC
1 CTAAACC
3840 CTAAACC
1 CTAAACC
3847 CTAAACC
1 CTAAACC
3854 CTAAACC
1 CTAAACC
3861 CTAAACC
1 CTAAACC
3868 CT-AACC
1 CTAAACC
3874 CTAAA-C
1 CTAAACC
3880 CTAAACC
1 CTAAACC
3887 CTAAACC
1 CTAAACC
3894 CTAAACC
1 CTAAACC
3901 CTAAACC
1 CTAAACC
3908 CTAAA-C
1 CTAAACC
3914 CTAAACC
1 CTAAACC
3921 CTAAACC
1 CTAAACC
3928 CTAAACC
1 CTAAACC
3935 CTAAACC
1 CTAAACC
3942 CTAAACC
1 CTAAACC
3949 CTAAACC
1 CTAAACC
3956 CTAAACC
1 CTAAACC
3963 CTAAACC
1 CTAAACC
3970 CTAAACC
1 CTAAACC
3977 CTAAACC
1 CTAAACC
3984 CTAAACC
1 CTAAACC
3991 CTAAACC
1 CTAAACC
3998 CTAAACC
1 CTAAACC
4005 CT-AACC
1 CTAAACC
4011 CT-AACC
1 CTAAACC
4017 CTAAAACC
1 CT-AAACC
4025 CTAAACC
1 CTAAACC
4032 CT-AACC
1 CTAAACC
4038 CTAAACC
1 CTAAACC
4045 CTAAACC
1 CTAAACC
4052 CTAAACC
1 CTAAACC
4059 CTAAACC
1 CTAAACC
4066 CTAAACC
1 CTAAACC
4073 CTAAACC
1 CTAAACC
4080 CTAAACC
1 CTAAACC
4087 CTAAACC
1 CTAAACC
4094 CTAAACC
1 CTAAACC
*
4101 CTAACCC
1 CTAAACC
4108 CTAAACC
1 CTAAACC
4115 CTAAACC
1 CTAAACC
4122 CTAAACC
1 CTAAACC
4129 CT-AACC
1 CTAAACC
4135 CTAAACC
1 CTAAACC
4142 CTAAACC
1 CTAAACC
4149 CTAAACC
1 CTAAACC
4156 CTAAA-C
1 CTAAACC
4162 CTAAACC
1 CTAAACC
4169 CT-AACC
1 CTAAACC
4175 CTAAACC
1 CTAAACC
4182 CTAAACC
1 CTAAACC
4189 CTAAACC
1 CTAAACC
4196 CTAAACC
1 CTAAACC
4203 CTAAACC
1 CTAAACC
4210 CT-AACC
1 CTAAACC
4216 CT-AACC
1 CTAAACC
4222 CTAAACC
1 CTAAACC
4229 C--AACC
1 CTAAACC
4234 C-AAACC
1 CTAAACC
4240 CTAAACC
1 CTAAACC
4247 CTAAACC
1 CTAAACC
4254 CTAAACC
1 CTAAACC
4261 CTAAACC
1 CTAAACC
4268 CTAAACC
1 CTAAACC
4275 CTAAACC
1 CTAAACC
4282 CTAAACC
1 CTAAACC
4289 CTAAACC
1 CTAAACC
4296 CTAAACC
1 CTAAACC
4303 CTAAACC
1 CTAAACC
4310 CTAAACC
1 CTAAACC
4317 CTAAACC
1 CTAAACC
4324 CTAAACC
1 CTAAACC
4331 CTAAACC
1 CTAAACC
4338 CTAAACC
1 CTAAACC
4345 CTAAACC
1 CTAAACC
4352 CT-AACC
1 CTAAACC
4358 CTAAA-C
1 CTAAACC
4364 CTAAACC
1 CTAAACC
4371 CTAAACC
1 CTAAACC
4378 CTAAACC
1 CTAAACC
4385 CTAAACC
1 CTAAACC
4392 CTAAACC
1 CTAAACC
4399 CTAAACC
1 CTAAACC
4406 CTAAACC
1 CTAAACC
4413 CTAAACC
1 CTAAACC
4420 CTAAACC
1 CTAAACC
4427 CTAAA-C
1 CTAAACC
4433 CT-AACC
1 CTAAACC
4439 CTAAA-C
1 CTAAACC
4445 CTAAACC
1 CTAAACC
4452 CTAAACC
1 CTAAACC
4459 CTAAACC
1 CTAAACC
4466 CTAAACC
1 CTAAACC
4473 CT-AACC
1 CTAAACC
4479 CTAAACC
1 CTAAACC
4486 CTAAACC
1 CTAAACC
4493 CT-AACC
1 CTAAACC
4499 CT-AACC
1 CTAAACC
4505 CTAAA-C
1 CTAAACC
4511 CTAAACC
1 CTAAACC
4518 CT--ACC
1 CTAAACC
4523 CTAAACC
1 CTAAACC
4530 CTAAACC
1 CTAAACC
4537 CTAAACC
1 CTAAACC
4544 CTAAACC
1 CTAAACC
4551 CTAAACC
1 CTAAACC
4558 CTAAACC
1 CTAAACC
4565 CT-AACC
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4571 CTAAACC
1 CTAAACC
4578 CTAAACC
1 CTAAACC
4585 CTAAACC
1 CTAAACC
4592 CTAAACC
1 CTAAACC
4599 CTAAACC
1 CTAAACC
4606 CTAAACC
1 CTAAACC
4613 C--AACC
1 CTAAACC
4618 CTAAACC
1 CTAAACC
4625 CTAAACC
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4632 CTAAACC
1 CTAAACC
4639 CTAAACC
1 CTAAACC
4646 CTAAACC
1 CTAAACC
4653 CTAAACC
1 CTAAACC
4660 CTAAACC
1 CTAAACC
4667 CTAAACC
1 CTAAACC
4674 CTAAACC
1 CTAAACC
4681 CTAAACC
1 CTAAACC
4688 CTAAACC
1 CTAAACC
4695 CTAAACC
1 CTAAACC
4702 CTAAACC
1 CTAAACC
4709 CTAAACC
1 CTAAACC
4716 CTAAACC
1 CTAAACC
4723 CTAAACC
1 CTAAACC
4730 CTAAACC
1 CTAAACC
4737 CTAAACC
1 CTAAACC
4744 CTAAACC
1 CTAAACC
4751 CTAAACC
1 CTAAACC
4758 CTAAACC
1 CTAAACC
4765 CTAAACC
1 CTAAACC
4772 CTAAACC
1 CTAAACC
4779 CTAAACC
1 CTAAACC
4786 CT-AACC
1 CTAAACC
*
4792 CTACA-C
1 CTAAACC
4798 CTAAACC
1 CTAAACC
4805 CTAAA-C
1 CTAAACC
4811 CTAAACC
1 CTAAACC
4818 CTAAACC
1 CTAAACC
4825 CTAAACC
1 CTAAACC
4832 CTAAACC
1 CTAAACC
4839 CTAAACC
1 CTAAACC
4846 CTAAACC
1 CTAAACC
4853 CTAAACC
1 CTAAACC
4860 CTAAAAACC
1 CT--AAACC
4869 C-AAACC
1 CTAAACC
4875 CTAAACC
1 CTAAACC
4882 CTAAACC
1 CTAAACC
4889 CTAAACC
1 CTAAACC
4896 CTAAACC
1 CTAAACC
4903 CTAAACC
1 CTAAACC
4910 CTAAACC
1 CTAAACC
4917 CTAAACC
1 CTAAACC
4924 CTAAACC
1 CTAAACC
4931 CTAAACC
1 CTAAACC
4938 C--AACC
1 CTAAACC
4943 CTAAAACC
1 CT-AAACC
4951 CTAAACC
1 CTAAACC
4958 CT-AA-C
1 CTAAACC
4963 CTAAACC
1 CTAAACC
4970 CTAAACC
1 CTAAACC
4977 CTAAACC
1 CTAAACC
4984 CTAAACC
1 CTAAACC
4991 CTAAACC
1 CTAAACC
4998 CTAAACC
1 CTAAACC
5005 CT-AACC
1 CTAAACC
5011 CTAAACC
1 CTAAACC
5018 CTAAACCC
1 CTAAA-CC
5026 CTAAACC
1 CTAAACC
5033 CTAAACC
1 CTAAACC
5040 CTAAACC
1 CTAAACC
5047 CTAAACC
1 CTAAACC
5054 CTAAACC
1 CTAAACC
5061 CTAAACC
1 CTAAACC
5068 CT-AACC
1 CTAAACC
5074 CTAAACC
1 CTAAACC
5081 CTAAACC
1 CTAAACC
5088 CTAAACC
1 CTAAACC
5095 CTAAACC
1 CTAAACC
5102 CTAAACC
1 CTAAACC
5109 CTAAACC
1 CTAAACC
5116 CTAAACC
1 CTAAACC
5123 CTAAACC
1 CTAAACC
5130 C--AACC
1 CTAAACC
5135 CTAAACC
1 CTAAACC
5142 CTAAACC
1 CTAAACC
5149 CTAAACC
1 CTAAACC
5156 CTAAA-C
1 CTAAACC
5162 CTAAACC
1 CTAAACC
5169 CTAAACC
1 CTAAACC
5176 CTAAACC
1 CTAAACC
5183 CTAAACC
1 CTAAACC
5190 CTAAACC
1 CTAAACC
5197 CTAAACC
1 CTAAACC
5204 CTAAACC
1 CTAAACC
5211 CTAAACC
1 CTAAACC
5218 CTAAACC
1 CTAAACC
5225 CTAAACC
1 CTAAACC
5232 CTAAACC
1 CTAAACC
5239 CTAAACC
1 CTAAACC
5246 CTAAACC
1 CTAAACC
5253 CTAAACC
1 CTAAACC
5260 CTAAACC
1 CTAAACC
5267 CTAAACC
1 CTAAACC
5274 CTAAACC
1 CTAAACC
5281 CTAAACC
1 CTAAACC
5288 CTAAACC
1 CTAAACC
5295 CTAAACC
1 CTAAACC
5302 CTAAACC
1 CTAAACC
5309 CTAAACC
1 CTAAACC
5316 CTAAACC
1 CTAAACC
5323 CTAAACC
1 CTAAACC
5330 CTAAACC
1 CTAAACC
5337 CTAAACC
1 CTAAACC
5344 CTAAACC
1 CTAAACC
5351 CTAAACC
1 CTAAACC
5358 CTAAACC
1 CTAAACC
5365 CT-AACC
1 CTAAACC
5371 CTAAACC
1 CTAAACC
5378 CTAAACC
1 CTAAACC
5385 CTAAACC
1 CTAAACC
5392 CTAAACC
1 CTAAACC
5399 CTAAACC
1 CTAAACC
5406 CTAAACC
1 CTAAACC
5413 CTAAACC
1 CTAAACC
5420 CTAAACC
1 CTAAACC
5427 CTAAACC
1 CTAAACC
5434 CT-AACC
1 CTAAACC
5440 CTAAACC
1 CTAAACC
5447 CTAAACC
1 CTAAACC
5454 CTAAACC
1 CTAAACC
5461 CTAAACC
1 CTAAACC
5468 CTAAACC
1 CTAAACC
5475 CTAAACC
1 CTAAACC
5482 CTAAACC
1 CTAAACC
5489 CT-AACC
1 CTAAACC
5495 CTAAACC
1 CTAAACC
5502 CTAAACC
1 CTAAACC
5509 CTAAACC
1 CTAAACC
5516 CTAAACC
1 CTAAACC
5523 CTAAACC
1 CTAAACC
5530 CTAAACC
1 CTAAACC
5537 CTAAACC
1 CTAAACC
5544 CTAAACC
1 CTAAACC
5551 CTAAACC
1 CTAAACC
5558 CTAAACC
1 CTAAACC
5565 CTAAACC
1 CTAAACC
5572 CTAAACC
1 CTAAACC
5579 CT-AACC
1 CTAAACC
5585 CT-AACC
1 CTAAACC
5591 CTAAACC
1 CTAAACC
5598 CTAAACC
1 CTAAACC
5605 CTAAACC
1 CTAAACC
5612 CTAAACC
1 CTAAACC
5619 CTAAACC
1 CTAAACC
5626 CTAAACC
1 CTAAACC
5633 CTAAACC
1 CTAAACC
5640 CTAAA-C
1 CTAAACC
5646 CTAAACC
1 CTAAACC
5653 CTAAACC
1 CTAAACC
5660 CTAAACC
1 CTAAACC
5667 CTAAACC
1 CTAAACC
5674 CTAAACC
1 CTAAACC
5681 CTAAACC
1 CTAAACC
5688 CTAAACC
1 CTAAACC
5695 CT-AACC
1 CTAAACC
5701 CTAAACC
1 CTAAACC
5708 CTAAACC
1 CTAAACC
5715 CTAAACC
1 CTAAACC
5722 CTAAACC
1 CTAAACC
5729 CTAAACC
1 CTAAACC
5736 CTAAACC
1 CTAAACC
5743 CT-AACC
1 CTAAACC
5749 CTAAACC
1 CTAAACC
5756 CTAAACC
1 CTAAACC
5763 CTAAACC
1 CTAAACC
5770 CTAAACC
1 CTAAACC
5777 CTAAACC
1 CTAAACC
5784 CTAAACC
1 CTAAACC
5791 CTAAACC
1 CTAAACC
5798 CTAAACC
1 CTAAACC
5805 CTAAACC
1 CTAAACC
5812 CTAAACC
1 CTAAACC
5819 CTAAACC
1 CTAAACC
5826 CTAAACC
1 CTAAACC
5833 CTAAACC
1 CTAAACC
5840 CTAAA-C
1 CTAAACC
5846 CT--ACC
1 CTAAACC
5851 CTAAACC
1 CTAAACC
5858 CTAAACC
1 CTAAACC
5865 CTAAA-C
1 CTAAACC
5871 CT-AACC
1 CTAAACC
5877 CTAAACC
1 CTAAACC
5884 CTAAACC
1 CTAAACC
5891 CTAAACC
1 CTAAACC
5898 CTAAACC
1 CTAAACC
5905 CTAAACC
1 CTAAACC
5912 CTAAACC
1 CTAAACC
5919 CTAAACC
1 CTAAACC
5926 CT-AACC
1 CTAAACC
5932 CTAAACC
1 CTAAACC
5939 CTAAACC
1 CTAAACC
5946 CTAAACC
1 CTAAACC
5953 CTAAACC
1 CTAAACC
5960 CTAAACC
1 CTAAACC
5967 CTAAACC
1 CTAAACC
5974 CTAAACC
1 CTAAACC
5981 CTAAACC
1 CTAAACC
5988 CTAAACC
1 CTAAACC
5995 CTAAACC
1 CTAAACC
6002 CTAAACC
1 CTAAACC
6009 CTAAACC
1 CTAAACC
6016 CTAAACC
1 CTAAACC
6023 CTAAACC
1 CTAAACC
6030 CTAAACC
1 CTAAACC
6037 CTAAACC
1 CTAAACC
6044 CTAAACC
1 CTAAACC
6051 CTAAACC
1 CTAAACC
6058 CT-AA-C
1 CTAAACC
6063 CT-AACC
1 CTAAACC
6069 CTAAACC
1 CTAAACC
6076 CTAAACC
1 CTAAACC
6083 CT-AACC
1 CTAAACC
6089 CTAAACC
1 CTAAACC
6096 CT-AACC
1 CTAAACC
6102 CTAAACC
1 CTAAACC
6109 CTAAAACC
1 CT-AAACC
6117 CTAAACC
1 CTAAACC
6124 CTAAACC
1 CTAAACC
6131 CTAAACC
1 CTAAACC
6138 CTAAACC
1 CTAAACC
6145 CTAAACC
1 CTAAACC
6152 C-AAACC
1 CTAAACC
6158 CTAAACC
1 CTAAACC
6165 CTAAACC
1 CTAAACC
6172 CTAAACC
1 CTAAACC
6179 CTAAACC
1 CTAAACC
6186 CTAAACC
1 CTAAACC
6193 CTAAACC
1 CTAAACC
6200 CT--A-C
1 CTAAACC
6204 CTAAACC
1 CTAAACC
6211 CTAAACC
1 CTAAACC
6218 CTAAACC
1 CTAAACC
6225 CTAAACC
1 CTAAACC
6232 CTAAACC
1 CTAAACC
6239 CTAAACC
1 CTAAACC
6246 CTAAACC
1 CTAAACC
6253 CTAAACC
1 CTAAACC
6260 CTAAACC
1 CTAAACC
6267 CTAAACC
1 CTAAACC
6274 CT-AACC
1 CTAAACC
6280 CTAAACC
1 CTAAACC
6287 CTAAACC
1 CTAAACC
6294 CTAAACC
1 CTAAACC
6301 CTAAACC
1 CTAAACC
6308 CTAAACC
1 CTAAACC
6315 CT-AACC
1 CTAAACC
6321 CTAAACC
1 CTAAACC
6328 CTAAACC
1 CTAAACC
6335 CTAAACC
1 CTAAACC
6342 CTAAACC
1 CTAAACC
6349 CT-AACC
1 CTAAACC
6355 CTAAACC
1 CTAAACC
6362 CTAAACC
1 CTAAACC
6369 C-AAACC
1 CTAAACC
6375 CTAAACC
1 CTAAACC
6382 CT-AACC
1 CTAAACC
6388 CTAAACC
1 CTAAACC
6395 CTAAACC
1 CTAAACC
6402 CTAAACC
1 CTAAACC
6409 CTAAACC
1 CTAAACC
6416 CTAAACC
1 CTAAACC
6423 CTAAACC
1 CTAAACC
6430 CTAAACC
1 CTAAACC
6437 CTAAA-C
1 CTAAACC
6443 CTAAACC
1 CTAAACC
6450 CT--ACC
1 CTAAACC
6455 CTAAACC
1 CTAAACC
6462 CTAAACC
1 CTAAACC
6469 CTAAACC
1 CTAAACC
6476 CTAAACC
1 CTAAACC
6483 CTAAACC
1 CTAAACC
6490 CTAAACC
1 CTAAACC
6497 CTAAACC
1 CTAAACC
6504 CTAAACC
1 CTAAACC
6511 CTAAACC
1 CTAAACC
6518 CT-AACC
1 CTAAACC
6524 CTAAA-C
1 CTAAACC
6530 CTAAACC
1 CTAAACC
6537 CTAAACC
1 CTAAACC
6544 CTAAACC
1 CTAAACC
6551 CTAAACC
1 CTAAACC
6558 CTAAACC
1 CTAAACC
6565 CTAAACC
1 CTAAACC
6572 CTAAACC
1 CTAAACC
6579 CTAAACC
1 CTAAACC
6586 CT-AACC
1 CTAAACC
6592 CTAAACC
1 CTAAACC
6599 CTAAACC
1 CTAAACC
6606 CTAAACC
1 CTAAACC
6613 CTAAACC
1 CTAAACC
6620 CTAAACC
1 CTAAACC
6627 CTAAACC
1 CTAAACC
6634 CTAAACC
1 CTAAACC
6641 CTAAACC
1 CTAAACC
6648 CTAAACC
1 CTAAACC
6655 CT-AACC
1 CTAAACC
6661 CTAAACC
1 CTAAACC
6668 CTAAACC
1 CTAAACC
6675 CTAAACC
1 CTAAACC
6682 CTAAACC
1 CTAAACC
6689 CTAAACC
1 CTAAACC
6696 CT-AACC
1 CTAAACC
6702 CT-AACC
1 CTAAACC
6708 C-AAACC
1 CTAAACC
6714 CTAAACC
1 CTAAACC
6721 CTAAACC
1 CTAAACC
6728 CTAAACC
1 CTAAACC
6735 CTAAACC
1 CTAAACC
6742 CTAAACC
1 CTAAACC
6749 CTAAACC
1 CTAAACC
6756 CTAAACC
1 CTAAACC
6763 CTAAACC
1 CTAAACC
6770 CTAAACC
1 CTAAACC
6777 CTAAACC
1 CTAAACC
6784 CTAAACC
1 CTAAACC
6791 CT-AACC
1 CTAAACC
6797 CTAAACC
1 CTAAACC
6804 CTAAACC
1 CTAAACC
6811 CTAAACC
1 CTAAACC
6818 CTAAACC
1 CTAAACC
6825 CTAAACC
1 CTAAACC
6832 CTAAACC
1 CTAAACC
6839 CT-AACC
1 CTAAACC
6845 CTAAACC
1 CTAAACC
6852 CTAAACC
1 CTAAACC
6859 CTAAACC
1 CTAAACC
6866 CTAAACC
1 CTAAACC
6873 CTAAACC
1 CTAAACC
6880 CTAAACC
1 CTAAACC
6887 CTAAACC
1 CTAAACC
6894 CTAAACC
1 CTAAACC
6901 CTAAACC
1 CTAAACC
6908 CTAAACC
1 CTAAACC
6915 CT-AACC
1 CTAAACC
6921 CTAAACC
1 CTAAACC
6928 CTAAACC
1 CTAAACC
6935 CT-AACC
1 CTAAACC
6941 CT-AACC
1 CTAAACC
6947 CTAAACC
1 CTAAACC
6954 CTAAACC
1 CTAAACC
6961 CTAAACC
1 CTAAACC
6968 CTAAACC
1 CTAAACC
6975 CTAAACC
1 CTAAACC
6982 CTAAACC
1 CTAAACC
6989 CTAAACC
1 CTAAACC
6996 CTAAACC
1 CTAAACC
7003 CTAAACC
1 CTAAACC
*
7010 CGAAACC
1 CTAAACC
7017 CTAAACC
1 CTAAACC
7024 CTAAACC
1 CTAAACC
7031 CT-AACC
1 CTAAACC
7037 CTAAACC
1 CTAAACC
7044 CTAAACC
1 CTAAACC
7051 CTAAACC
1 CTAAACC
7058 CTAAACC
1 CTAAACC
7065 CT-AACC
1 CTAAACC
7071 CTAAA-C
1 CTAAACC
7077 CTAAACC
1 CTAAACC
7084 CTAAACC
1 CTAAACC
7091 CTAAACC
1 CTAAACC
7098 CTAAACC
1 CTAAACC
7105 CTAAACC
1 CTAAACC
7112 CTAAACC
1 CTAAACC
7119 CTAAACC
1 CTAAACC
7126 CT-AACC
1 CTAAACC
7132 CTAAACC
1 CTAAACC
7139 CTAAACC
1 CTAAACC
7146 C-AAACC
1 CTAAACC
7152 CTAAACC
1 CTAAACC
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1 CTAAACC
7166 CTAAACC
1 CTAAACC
7173 CTAAA-C
1 CTAAACC
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1 CTAAACC
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1 CTAAACC
7200 CTAAACC
1 CTAAACC
7207 CTAAACC
1 CTAAACC
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7235 CTAAACC
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7270 CTAAACC
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1 CTAAACC
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1 CTAAACC
7514 CTAAA-C
1 CTAAACC
7520 CTAAACC
1 CTAAACC
7527 CTAAACC
1 CTAAACC
7534 CTAAA-C
1 CTAAACC
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1 CTAAACC
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1 CTAAACC
7554 CTAAAACC
1 CT-AAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CT-AAACC
7955 CT-AACC
1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
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1 CTAAACC
8043 CT-AACC
1 CTAAACC
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1 CTAAACC
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1 CTAAACC
8062 CTAAACC
1 CTAAACC
8069 CTAAACC
1 CTAAACC
8076 CTAAACC
1 CTAAACC
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1 CTAAACC
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1 CTAAACC
8096 CTAAACC
1 CTAAACC
8103 CTAAA-C
1 CTAAACC
8109 CT-AACC
1 CTAAACC
8115 CTAAA-C
1 CTAAACC
8121 CT-AACC
1 CTAAACC
8127 CTAAACC
1 CTAAACC
8134 CTAAACC
1 CTAAACC
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1 CTAAACC
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1 CTAAACC
8153 CTAAACC
1 CTAAACC
8160 CT-AACC
1 CTAAACC
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1 CTAAACC
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1 CTAAACC
8180 CT-AACC
1 CTAAACC
8186 CTAAACC
1 CTAAACC
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1 CTAAACC
8199 CTAAACC
1 CTAAACC
8206 CTAAACC
1 CTAAACC
8213 CTAAACC
1 CTAAACC
8220 CT-AACC
1 CTAAACC
8226 CTAAACC
1 CTAAACC
8233 CTAAACC
1 CTAAACC
8240 CT-AACC
1 CTAAACC
*
8246 CTAAGCC
1 CTAAACC
*
8253 CTAAGCC
1 CTAAACC
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8260 CTAAGCC
1 CTAAACC
*
8267 CTAAGCC
1 CTAAACC
*
8274 CTAAGCC
1 CTAAACC
*
8281 CTAAGCC
1 CTAAACC
*
8288 CTAAGCC
1 CTAAACC
*
8295 CTAAGCC
1 CTAAACC
*
8302 CTAAGCC
1 CTAAACC
*
8309 CTAAGCC
1 CTAAACC
*
8316 CTAAGCC
1 CTAAACC
*
8323 CTAAGCC
1 CTAAACC
*
8330 CTAAGCC
1 CTAAACC
*
8337 CTAAGCC
1 CTAAACC
*
8344 CTAAGCC
1 CTAAACC
*
8351 CTAAGCC
1 CTAAACC
*
8358 CTAAGCC
1 CTAAACC
*
8365 CTAAGCC
1 CTAAACC
*
8372 CTAAGCC
1 CTAAACC
*
8379 CTAAGCC
1 CTAAACC
*
8386 CTAAGCC
1 CTAAACC
*
8393 CTAAGCC
1 CTAAACC
*
8400 CTAAGCC
1 CTAAACC
*
8407 CTAAGCC
1 CTAAACC
*
8414 CTAAGCC
1 CTAAACC
*
8421 CTAAGCC
1 CTAAACC
*
8428 CTAAGCC
1 CTAAACC
*
8435 CT-AAGC
1 CTAAACC
*
8441 CTAAGCC
1 CTAAACC
*
8448 CTAAGCC
1 CTAAACC
*
8455 CTAAGCC
1 CTAAACC
*
8462 CTAAGCCCCC
1 CTAA---ACC
*
8472 CTAAGCC
1 CTAAACC
*
8479 CTAAGCC
1 CTAAACC
*
8486 CTAAGCC
1 CTAAACC
*
8493 CTAAGCC
1 CTAAACC
*
8500 CTAAGCC
1 CTAAACC
*
8507 CTAAGCC
1 CTAAACC
*
8514 CTAAGCC
1 CTAAACC
*
8521 CTAAGCC
1 CTAAACC
*
8528 CTAAGCC
1 CTAAACC
*
8535 CT-AAGC
1 CTAAACC
*
8541 CTAAGCC
1 CTAAACC
*
8548 CTAAGCC
1 CTAAACC
*
8555 CTAAGCCCC
1 CTAA--ACC
*
8564 CTAAGCC
1 CTAAACC
*
8571 CT-AAGC
1 CTAAACC
*
8577 CTAAGCC
1 CTAAACC
*
8584 CTAAGCC
1 CTAAACC
*
8591 CTAAGCC
1 CTAAACC
*
8598 CTAAGCC
1 CTAAACC
*
8605 CTAAGCC
1 CTAAACC
*
8612 CTAAGCC
1 CTAAACC
*
8619 CT-AAGC
1 CTAAACC
*
8625 CTAAGCC
1 CTAAACC
*
8632 CTAAGCC
1 CTAAACC
*
8639 CTAAGCC
1 CTAAACC
*
8646 CTAAGCC
1 CTAAACC
*
8653 CTAAGCC
1 CTAAACC
*
8660 CTAAGCC
1 CTAAACC
*
8667 CTAAGCC
1 CTAAACC
*
8674 CTAAGCC
1 CTAAACC
*
8681 CTAAGCC
1 CTAAACC
*
8688 CTAAGCC
1 CTAAACC
*
8695 CTAAGCC
1 CTAAACC
*
8702 CTAAGCC
1 CTAAACC
*
8709 CTAAGCC
1 CTAAACC
*
8716 CTAAGCC
1 CTAAACC
*
8723 CTAAGCC
1 CTAAACC
*
8730 CTAAGCC
1 CTAAACC
*
8737 CTAAGCC
1 CTAAACC
*
8744 CTAAGCC
1 CTAAACC
*
8751 CT-AAGC
1 CTAAACC
*
8757 CTAAGCC
1 CTAAACC
*
8764 CTAAGCC
1 CTAAACC
*
8771 CTAAGCC
1 CTAAACC
*
8778 CTAAGCC
1 CTAAACC
*
8785 CTAAGCC
1 CTAAACC
*
8792 CTAAGCC
1 CTAAACC
*
8799 CTAAGCC
1 CTAAACC
*
8806 CTAAGCC
1 CTAAACC
*
8813 CTAAGCC
1 CTAAACC
*
8820 CTAAGCC
1 CTAAACC
*
8827 CTAAGCC
1 CTAAACC
*
8834 CTAAGCC
1 CTAAACC
*
8841 CTAAGCC
1 CTAAACC
*
8848 CTAAGCC
1 CTAAACC
*
8855 CTAAGCC
1 CTAAACC
*
8862 CTAAGCC
1 CTAAACC
*
8869 CTAAGCC
1 CTAAACC
*
8876 CTAAGCC
1 CTAAACC
*
8883 CTAAGCC
1 CTAAACC
*
8890 CTAAGCC
1 CTAAACC
*
8897 CTAAGCC
1 CTAAACC
*
8904 CTAAGCC
1 CTAAACC
*
8911 CTAAGCC
1 CTAAACC
*
8918 CTAAGCC
1 CTAAACC
*
8925 CTAAGCC
1 CTAAACC
*
8932 CTAAGCC
1 CTAAACC
*
8939 CTAAGCC
1 CTAAACC
*
8946 CTAAGCC
1 CTAAACC
*
8953 CTAAGCC
1 CTAAACC
*
8960 CTAAGCC
1 CTAAACC
*
8967 CTAAGCC
1 CTAAACC
*
8974 CTAAGCC
1 CTAAACC
*
8981 CTAAGCC
1 CTAAACC
*
8988 CTAAGCC
1 CTAAACC
*
8995 CTAAGCC
1 CTAAACC
*
9002 CTAAGCC
1 CTAAACC
*
9009 CTAAGCC
1 CTAAACC
*
9016 CTAAGCC
1 CTAAACC
*
9023 CTAAGCC
1 CTAAACC
*
9030 CTAAGCC
1 CTAAACC
*
9037 CTAAGCC
1 CTAAACC
*
9044 CTAAGCC
1 CTAAACC
*
9051 CTAAGCC
1 CTAAACC
*
9058 CTAAGCC
1 CTAAACC
*
9065 CTAAGCC
1 CTAAACC
*
9072 CTAAGCC
1 CTAAACC
*
9079 CTAAGCC
1 CTAAACC
*
9086 CTAAGCC
1 CTAAACC
*
9093 CTAAGCC
1 CTAAACC
*
9100 CTAAGCC
1 CTAAACC
*
9107 CTAAGCC
1 CTAAACC
*
9114 CTAAGCC
1 CTAAACC
*
9121 CT-AAGC
1 CTAAACC
*
9127 CTAAGCC
1 CTAAACC
*
9134 CTAAGCC
1 CTAAACC
*
9141 CTAAGCC
1 CTAAACC
*
9148 CTAAGCC
1 CTAAACC
*
9155 CTAAGCC
1 CTAAACC
*
9162 CTAAGCC
1 CTAAACC
*
9169 CTAAGCC
1 CTAAACC
*
9176 CTAAGCC
1 CTAAACC
*
9183 CTAAGCC
1 CTAAACC
*
9190 CTAAGCC
1 CTAAACC
*
9197 CTAAGCC
1 CTAAACC
*
9204 CTAAGCC
1 CTAAACC
*
9211 CTAAGCC
1 CTAAACC
*
9218 CTAAGCC
1 CTAAACC
*
9225 CTAAGCC
1 CTAAACC
*
9232 CTAAGCC
1 CTAAACC
*
9239 CTAAGCC
1 CTAAACC
*
9246 CTAAGCC
1 CTAAACC
*
9253 CT-AAGC
1 CTAAACC
*
9259 CTAAGCC
1 CTAAACC
*
9266 CTAAGCC
1 CTAAACC
*
9273 CTAAGCC
1 CTAAACC
*
9280 CTAAGCC
1 CTAAACC
*
9287 CTAAGCC
1 CTAAACC
*
9294 CTAAGCC
1 CTAAACC
*
9301 CTAAGCC
1 CTAAACC
*
9308 CTAAGCC
1 CTAAACC
*
9315 CTAAGCC
1 CTAAACC
*
9322 CTAAGCC
1 CTAAACC
*
9329 CTAAGCC
1 CTAAACC
*
9336 CTAAGCC
1 CTAAACC
*
9343 CTAAGCC
1 CTAAACC
*
9350 CTAAGCC
1 CTAAACC
*
9357 CTAAGCC
1 CTAAACC
*
9364 CTAAGCC
1 CTAAACC
*
9371 CTAAGCC
1 CTAAACC
*
9378 CTAAGCC
1 CTAAACC
*
9385 CTAAGCC
1 CTAAACC
*
9392 CTAAGCC
1 CTAAACC
*
9399 CTAAGCC
1 CTAAACC
*
9406 CTAAGCC
1 CTAAACC
*
9413 CTAAGCC
1 CTAAACC
*
9420 CT-AAGC
1 CTAAACC
*
9426 CTAAGCC
1 CTAAACC
*
9433 CTAAGCC
1 CTAAACC
*
9440 CTAAGCC
1 CTAAACC
*
9447 CTAAGCC
1 CTAAACC
*
9454 CTAAGCC
1 CTAAACC
*
9461 CTAAGCC
1 CTAAACC
*
9468 CTAAGCC
1 CTAAACC
*
9475 CTAAGCC
1 CTAAACC
*
9482 CTAAGCC
1 CTAAACC
*
9489 CTAAGCC
1 CTAAACC
*
9496 CTAAGCC
1 CTAAACC
*
9503 CTAAGCC
1 CTAAACC
*
9510 CTAAGCC
1 CTAAACC
*
9517 CTAAGCC
1 CTAAACC
*
9524 CTAAGCC
1 CTAAACC
*
9531 CTAAGCC
1 CTAAACC
*
9538 CT-AAGC
1 CTAAACC
*
9544 CT-AAGC
1 CTAAACC
*
9550 CTAAGCC
1 CTAAACC
*
9557 CTAAGCC
1 CTAAACC
*
9564 CTAAGCC
1 CTAAACC
*
9571 CTAAGCC
1 CTAAACC
*
9578 CTAAGCC
1 CTAAACC
*
9585 CTAAGCC
1 CTAAACC
*
9592 CTAAGCC
1 CTAAACC
*
9599 CTAAGCC
1 CTAAACC
*
9606 CTAAGCC
1 CTAAACC
*
9613 CTAAGCC
1 CTAAACC
*
9620 CTAAGCC
1 CTAAACC
*
9627 CTAAGCC
1 CTAAACC
*
9634 CTAAGCC
1 CTAAACC
*
9641 CTAAGCC
1 CTAAACC
*
9648 CTAAGCC
1 CTAAACC
*
9655 CTAAGCC
1 CTAAACC
*
9662 CTAAGCC
1 CTAAACC
*
9669 CTAAGCC
1 CTAAACC
*
9676 CTAAGCC
1 CTAAACC
*
9683 CTAAGCC
1 CTAAACC
*
9690 CTAAGCC
1 CTAAACC
*
9697 CTAAGCC
1 CTAAACC
*
9704 CTAAGCC
1 CTAAACC
*
9711 CTAAGCC
1 CTAAACC
*
9718 CT-AAGC
1 CTAAACC
*
9724 CTAAGCC
1 CTAAACC
*
9731 CTAAGCC
1 CTAAACC
*
9738 CTAAGCC
1 CTAAACC
*
9745 CTAAGCC
1 CTAAACC
*
9752 CTAAGCC
1 CTAAACC
*
9759 CTAAGCC
1 CTAAACC
*
9766 CTAAGCC
1 CTAAACC
*
9773 CTAAGCC
1 CTAAACC
*
9780 CTAAGCC
1 CTAAACC
*
9787 CTAAGCC
1 CTAAACC
*
9794 CTAAGCC
1 CTAAACC
*
9801 CTAAGCC
1 CTAAACC
*
9808 CTAAGCC
1 CTAAACC
*
9815 CTAAGCC
1 CTAAACC
*
9822 CTAAGCC
1 CTAAACC
*
9829 CTAAGCC
1 CTAAACC
*
9836 CTAAGCC
1 CTAAACC
*
9843 CTAAGCC
1 CTAAACC
*
9850 CTAAGCC
1 CTAAACC
*
9857 CTAAGCC
1 CTAAACC
*
9864 CTAAGCC
1 CTAAACC
9871 CT---CC
1 CTAAACC
*
9875 CTAAGCC
1 CTAAACC
*
9882 CTAAGCC
1 CTAAACC
*
9889 CTAAGCC
1 CTAAACC
*
9896 CTAAGCC
1 CTAAACC
*
9903 CTAAGCC
1 CTAAACC
*
9910 CTAAGCC
1 CTAAACC
*
9917 CTAAGCC
1 CTAAACC
*
9924 CTAAGCC
1 CTAAACC
*
9931 CTAAGCC
1 CTAAACC
*
9938 CTAAGCC
1 CTAAACC
*
9945 CTAAGCC
1 CTAAACC
*
9952 CTAAGCC
1 CTAAACC
*
9959 CTAAGCC
1 CTAAACC
*
9966 CTAAGCC
1 CTAAACC
*
9973 CTAAGCC
1 CTAAACC
*
9980 CTAAGCC
1 CTAAACC
*
9987 CTAAGCC
1 CTAAACC
*
9994 CTAAGCC
1 CTAAACC
*
10001 CTAAGCC
1 CTAAACC
*
10008 CTAAGCC
1 CTAAACC
*
10015 CTAAGCC
1 CTAAACC
*
10022 CTAAGCC
1 CTAAACC
*
10029 CTAAGCC
1 CTAAACC
*
10036 CT-AAGC
1 CTAAACC
*
10042 CTAAGCC
1 CTAAACC
*
10049 CTAAGCC
1 CTAAACC
*
10056 CTAAGCC
1 CTAAACC
*
10063 CTAAGCC
1 CTAAACC
*
10070 CTAAGCC
1 CTAAACC
*
10077 CTAAGCC
1 CTAAACC
*
10084 CTAAGCC
1 CTAAACC
*
10091 CTAAGCC
1 CTAAACC
*
10098 CTAAGCC
1 CTAAACC
*
10105 CTAAGCC
1 CTAAACC
*
10112 CTAAGCC
1 CTAAACC
*
10119 CTAAGCC
1 CTAAACC
*
10126 CTAAGCC
1 CTAAACC
*
10133 CTAAGCC
1 CTAAACC
*
10140 CTAAGCC
1 CTAAACC
*
10147 CTAAGCC
1 CTAAACC
*
10154 CTAAGCC
1 CTAAACC
*
10161 CTAAGCC
1 CTAAACC
*
10168 CTAAGCC
1 CTAAACC
*
10175 CTAAGCC
1 CTAAACC
*
10182 CTAAGCC
1 CTAAACC
*
10189 CTAAGCC
1 CTAAACC
*
10196 CTAAGCC
1 CTAAACC
*
10203 CTAAGCC
1 CTAAACC
*
10210 CTAAGCC
1 CTAAACC
*
10217 CTAAGCC
1 CTAAACC
*
10224 CTAAGCC
1 CTAAACC
*
10231 CTAAGCC
1 CTAAACC
*
10238 CTAAGCC
1 CTAAACC
*
10245 CTAAGCC
1 CTAAACC
*
10252 CTAAGCC
1 CTAAACC
*
10259 CTAAGCC
1 CTAAACC
*
10266 CTAAGCC
1 CTAAACC
*
10273 CTAAGCC
1 CTAAACC
*
10280 CTAAGCC
1 CTAAACC
*
10287 CTAAGCC
1 CTAAACC
*
10294 CTAAGCC
1 CTAAACC
*
10301 CTAAGCC
1 CTAAACC
*
10308 CTAAGCC
1 CTAAACC
*
10315 CTAAGCC
1 CTAAACC
*
10322 CT-AAGC
1 CTAAACC
*
10328 CTAAGCC
1 CTAAACC
*
10335 CTAAGCC
1 CTAAACC
*
10342 CTAAGCC
1 CTAAACC
*
10349 CTAAGCC
1 CTAAACC
*
10356 CTAAGCC
1 CTAAACC
*
10363 CTAAGCC
1 CTAAACC
*
10370 CTAAGCC
1 CTAAACC
*
10377 CTAAGCC
1 CTAAACC
*
10384 CTAAGCC
1 CTAAACC
*
10391 CTAAGCC
1 CTAAACC
*
10398 CTAAGCC
1 CTAAACC
*
10405 CTAAGCC
1 CTAAACC
*
10412 CTAAGCC
1 CTAAACC
*
10419 CTAAGCC
1 CTAAACC
*
10426 CTAAGCC
1 CTAAACC
*
10433 CTAAGCC
1 CTAAACC
*
10440 CTAAGCC
1 CTAAACC
*
10447 CTAAGCC
1 CTAAACC
*
10454 CTAAGCC
1 CTAAACC
*
10461 CTAAGCC
1 CTAAACC
*
10468 CTAAGCC
1 CTAAACC
*
10475 CTAAGCC
1 CTAAACC
*
10482 CTAAGCC
1 CTAAACC
*
10489 CTAAGCC
1 CTAAACC
*
10496 CTAAGCC
1 CTAAACC
*
10503 CTAAGCC
1 CTAAACC
*
10510 CTAAGCC
1 CTAAACC
*
10517 CTAAGCC
1 CTAAACC
*
10524 CTAAGCC
1 CTAAACC
*
10531 CTAAGCC
1 CTAAACC
*
10538 CTAAGCC
1 CTAAACC
*
10545 CTAAGCC
1 CTAAACC
*
10552 CTAAGCC
1 CTAAACC
*
10559 CTAAGCC
1 CTAAACC
*
10566 CTAAGCC
1 CTAAACC
*
10573 CTAAGCC
1 CTAAACC
*
10580 CTAAGCC
1 CTAAACC
*
10587 CTAAGCC
1 CTAAACC
*
10594 CTAAGCC
1 CTAAACC
*
10601 CTAAGCC
1 CTAAACC
*
10608 CTAAGCC
1 CTAAACC
*
10615 CTAAGCC
1 CTAAACC
*
10622 CTAAGCC
1 CTAAACC
*
10629 CTAAGCC
1 CTAAACC
*
10636 CTAAGCC
1 CTAAACC
*
10643 CTAAGCC
1 CTAAACC
*
10650 CTAAGCC
1 CTAAACC
*
10657 CTAAGCC
1 CTAAACC
*
10664 CTAAGCC
1 CTAAACC
*
10671 CTAAGCC
1 CTAAACC
*
10678 CTAAGCC
1 CTAAACC
*
10685 CTAAGCC
1 CTAAACC
*
10692 CTAAGCC
1 CTAAACC
*
10699 CTAAGCC
1 CTAAACC
*
10706 CTAAGCC
1 CTAAACC
*
10713 CTAAGCC
1 CTAAACC
*
10720 CTAAGCC
1 CTAAACC
*
10727 CTAAGCC
1 CTAAACC
*
10734 CTAAGCC
1 CTAAACC
*
10741 CTAAGCC
1 CTAAACC
*
10748 CTAAGCC
1 CTAAACC
*
10755 CTAAGCC
1 CTAAACC
*
10762 CTAAGCC
1 CTAAACC
*
10769 CTAAGCC
1 CTAAACC
*
10776 CTAAGCC
1 CTAAACC
*
10783 CTAAGCC
1 CTAAACC
*
10790 CTAAGCC
1 CTAAACC
*
10797 CTAAGCC
1 CTAAACC
*
10804 CTAAGCC
1 CTAAACC
*
10811 CT-AAGC
1 CTAAACC
*
10817 CTAAGCC
1 CTAAACC
*
10824 CTAAGCC
1 CTAAACC
*
10831 CTAAGCC
1 CTAAACC
*
10838 CTAAGCC
1 CTAAACC
*
10845 CTAAGCC
1 CTAAACC
*
10852 CTAAGCC
1 CTAAACC
*
10859 CTAAGCC
1 CTAAACC
*
10866 CTAAGCC
1 CTAAACC
*
10873 CTAAGCC
1 CTAAACC
*
10880 CTAAGCC
1 CTAAACC
*
10887 CTAAGCC
1 CTAAACC
*
10894 CTAAGCC
1 CTAAACC
*
10901 CTAAGCC
1 CTAAACC
*
10908 CTAAGCC
1 CTAAACC
*
10915 CTAAGCC
1 CTAAACC
*
10922 CTAAGCC
1 CTAAACC
*
10929 CTAAGCC
1 CTAAACC
*
10936 CTAAGCC
1 CTAAACC
*
10943 CT-AAGC
1 CTAAACC
*
10949 C-AAGCC
1 CTAAACC
* *
10955 C-GAGCC
1 CTAAACC
* *
10961 C-GAGCC
1 CTAAACC
* **
10967 CGAGCCC
1 CTAAACC
* *
10974 CGAAGCC
1 CTAAACC
* *
10981 C-GAGCC
1 CTAAACC
* *
10987 CGAAGCC
1 CTAAACC
* *
10994 C-GAGCC
1 CTAAACC
*
11000 CTAAGCC
1 CTAAACC
* *
11007 CGAAGCC
1 CTAAACC
* *
11014 C-GAGCC
1 CTAAACC
*
11020 C--AGCC
1 CTAAACC
*
11025 CTAAGCC
1 CTAAACC
*
11032 CTAAGCC
1 CTAAACC
*
11039 CTAAGCC
1 CTAAACC
*
11046 CTAAGCC
1 CTAAACC
* *
11053 C-GAGCC
1 CTAAACC
*
11059 CTAAGCC
1 CTAAACC
*
11066 CTAAGCC
1 CTAAACC
*
11073 CTAAGCC
1 CTAAACC
*
11080 CTAAGCC
1 CTAAACC
*
11087 CTAAGCC
1 CTAAACC
*
11094 CTAAGCC
1 CTAAACC
*
11101 CTAAGCC
1 CTAAACC
*
11108 CTAAGCC
1 CTAAACC
*
11115 CTAAGCC
1 CTAAACC
*
11122 CTAAGCC
1 CTAAACC
*
11129 CTAAGCC
1 CTAAACC
*
11136 CTAAGCC
1 CTAAACC
*
11143 CTAAGCC
1 CTAAACC
*
11150 CTAAGCC
1 CTAAACC
*
11157 CTAAGCC
1 CTAAACC
*
11164 CTAAGCC
1 CTAAACC
*
11171 CTAAGCC
1 CTAAACC
*
11178 CTAAGCC
1 CTAAACC
*
11185 CTAAGCC
1 CTAAACC
*
11192 CTAAGCC
1 CTAAACC
*
11199 CTAAGCC
1 CTAAACC
*
11206 CTAAGCC
1 CTAAACC
*
11213 CTAAGCC
1 CTAAACC
*
11220 CTAAGCC
1 CTAAACC
*
11227 CTAAGCC
1 CTAAACC
*
11234 CTAAGCC
1 CTAAACC
*
11241 CTAAGCC
1 CTAAACC
*
11248 CTAAGCC
1 CTAAACC
*
11255 CTAAGCC
1 CTAAACC
*
11262 CTAAGCC
1 CTAAACC
*
11269 CTAAGCC
1 CTAAACC
*
11276 CTAAGCC
1 CTAAACC
*
11283 CTAAGCC
1 CTAAACC
*
11290 CTAAGCC
1 CTAAACC
*
11297 CTAAGCC
1 CTAAACC
*
11304 CTAAGCC
1 CTAAACC
*
11311 CTAAGCC
1 CTAAACC
*
11318 CTAAGCC
1 CTAAACC
*
11325 CTAAGCC
1 CTAAACC
*
11332 CTAAGCC
1 CTAAACC
*
11339 CTAAGCC
1 CTAAACC
*
11346 CTAAGCC
1 CTAAACC
*
11353 CTAAGCC
1 CTAAACC
*
11360 CTAAGCC
1 CTAAACC
*
11367 CTAAGCC
1 CTAAACC
*
11374 CTAAGCC
1 CTAAACC
*
11381 CTAAGCC
1 CTAAACC
*
11388 CTAAGCC
1 CTAAACC
*
11395 CTAAGCC
1 CTAAACC
*
11402 CTAAGCC
1 CTAAACC
*
11409 CTAAGCC
1 CTAAACC
*
11416 CTAAGCC
1 CTAAACC
*
11423 CTAAGCC
1 CTAAACC
*
11430 CTAAGCC
1 CTAAACC
*
11437 CTAAGCC
1 CTAAACC
*
11444 CTAAGCC
1 CTAAACC
*
11451 CTAAGCC
1 CTAAACC
*
11458 CTAAGCC
1 CTAAACC
*
11465 CTAAGCC
1 CTAAACC
*
11472 CTAAGCC
1 CTAAACC
*
11479 CTAAGCC
1 CTAAACC
*
11486 CTAAGCC
1 CTAAACC
*
11493 CTAAGCC
1 CTAAACC
*
11500 CTAAGCC
1 CTAAACC
*
11507 CTAAGCC
1 CTAAACC
*
11514 CTAAGCC
1 CTAAACC
*
11521 CTAAGCC
1 CTAAACC
*
11528 CTAAGCC
1 CTAAACC
*
11535 CTAAGCC
1 CTAAACC
*
11542 CTAAGCC
1 CTAAACC
*
11549 CTAAGCC
1 CTAAACC
*
11556 CTAAGCC
1 CTAAACC
*
11563 CTAAGCC
1 CTAAACC
*
11570 CTAAGCC
1 CTAAACC
*
11577 CTAAGCC
1 CTAAACC
*
11584 CTAAGCC
1 CTAAACC
*
11591 CTAAGCC
1 CTAAACC
*
11598 CTAAGCC
1 CTAAACC
*
11605 CT-AAGC
1 CTAAACC
*
11611 CTAAGCC
1 CTAAACC
*
11618 CTAAGCC
1 CTAAACC
*
11625 CTAAGCC
1 CTAAACC
*
11632 CTAAGCC
1 CTAAACC
*
11639 CTAAGCC
1 CTAAACC
*
11646 CTAAGCC
1 CTAAACC
*
11653 CTAAGCC
1 CTAAACC
*
11660 CTAAGCC
1 CTAAACC
*
11667 CTAAGCC
1 CTAAACC
*
11674 CTAAGCC
1 CTAAACC
*
11681 CTAAGCC
1 CTAAACC
*
11688 CTAAGCC
1 CTAAACC
*
11695 CTAAGCC
1 CTAAACC
*
11702 CTAAGCC
1 CTAAACC
*
11709 CTAAGCC
1 CTAAACC
*
11716 CTAAGCC
1 CTAAACC
*
11723 CTAAGCC
1 CTAAACC
*
11730 CTAAGCC
1 CTAAACC
*
11737 CTAAGCC
1 CTAAACC
*
11744 CTAAGCC
1 CTAAACC
*
11751 CTAAGCC
1 CTAAACC
*
11758 CTAAGCC
1 CTAAACC
*
11765 CTAAGCC
1 CTAAACC
*
11772 CTAAGCC
1 CTAAACC
*
11779 CTAAGCC
1 CTAAACC
*
11786 CTAAGCC
1 CTAAACC
*
11793 CTAAGCC
1 CTAAACC
*
11800 CTAAGCC
1 CTAAACC
*
11807 CTAAGCC
1 CTAAACC
*
11814 CTAAGCC
1 CTAAACC
*
11821 CTAAGCC
1 CTAAACC
*
11828 CTAAGCC
1 CTAAACC
*
11835 CTAAGCC
1 CTAAACC
*
11842 CTAAGCC
1 CTAAACC
*
11849 CTAAGCC
1 CTAAACC
*
11856 CTAAGCC
1 CTAAACC
*
11863 CTAAGCC
1 CTAAACC
*
11870 CTAAGCC
1 CTAAACC
*
11877 CTAAGCC
1 CTAAACC
*
11884 CTAAGCC
1 CTAAACC
*
11891 CTAAGCC
1 CTAAACC
*
11898 CTAAGCC
1 CTAAACC
*
11905 CTAAGCC
1 CTAAACC
*
11912 CTAAGCC
1 CTAAACC
*
11919 CTAAGCC
1 CTAAACC
*
11926 CTAAGCC
1 CTAAACC
*
11933 CTAAGCC
1 CTAAACC
*
11940 CTAAGCC
1 CTAAACC
*
11947 CTAAGCC
1 CTAAACC
*
11954 CTAAGCC
1 CTAAACC
*
11961 CTAAGCC
1 CTAAACC
*
11968 CTAAGCC
1 CTAAACC
*
11975 CTAAGCC
1 CTAAACC
*
11982 CTAAGCC
1 CTAAACC
*
11989 CTAAGCC
1 CTAAACC
*
11996 CTAAGCC
1 CTAAACC
*
12003 CTAAGCC
1 CTAAACC
*
12010 CTAAGCC
1 CTAAACC
*
12017 CTAAGCC
1 CTAAACC
*
12024 CTAAGCC
1 CTAAACC
*
12031 CTAAGCC
1 CTAAACC
*
12038 CTAAGCC
1 CTAAACC
*
12045 CTAAGCC
1 CTAAACC
*
12052 CTAAGCC
1 CTAAACC
*
12059 CTAAGCC
1 CTAAACC
*
12066 CTAAGCC
1 CTAAACC
*
12073 CTAAGCC
1 CTAAACC
*
12080 CTAAGCC
1 CTAAACC
*
12087 CTAAGCC
1 CTAAACC
*
12094 CTAAGCC
1 CTAAACC
*
12101 CTAAGCC
1 CTAAACC
*
12108 CTAAGCC
1 CTAAACC
*
12115 CTAAGCC
1 CTAAACC
*
12122 CTAAGCC
1 CTAAACC
*
12129 CTAAGCC
1 CTAAACC
*
12136 CT-AAGC
1 CTAAACC
*
12142 CTAAGCC
1 CTAAACC
*
12149 CTAAGCC
1 CTAAACC
*
12156 CTAAGCC
1 CTAAACC
*
12163 CTAAGCC
1 CTAAACC
*
12170 CTAAGCC
1 CTAAACC
*
12177 CTAAGCC
1 CTAAACC
*
12184 CTAAGCC
1 CTAAACC
*
12191 CTAAGCC
1 CTAAACC
*
12198 CTAAGCC
1 CTAAACC
*
12205 CTAAGCC
1 CTAAACC
*
12212 CTAAGCC
1 CTAAACC
*
12219 CTAAGCC
1 CTAAACC
*
12226 CTAAGCC
1 CTAAACC
*
12233 CTAAGCC
1 CTAAACC
*
12240 CTAAGCC
1 CTAAACC
*
12247 CTAAGCC
1 CTAAACC
*
12254 CTAAGCC
1 CTAAACC
*
12261 CTAAGCC
1 CTAAACC
*
12268 CTAAGCC
1 CTAAACC
*
12275 CTAAGCC
1 CTAAACC
*
12282 CTAAGCC
1 CTAAACC
*
12289 CTAAGCC
1 CTAAACC
*
12296 CTAAGCC
1 CTAAACC
*
12303 CT-AAGC
1 CTAAACC
*
12309 CTAAGCC
1 CTAAACC
*
12316 CTAAGCC
1 CTAAACC
*
12323 CTAAGCC
1 CTAAACC
*
12330 CTAAGCC
1 CTAAACC
*
12337 CTAAGCC
1 CTAAACC
*
12344 CTAAGCC
1 CTAAACC
*
12351 CTAAGCC
1 CTAAACC
*
12358 CTAAGCC
1 CTAAACC
*
12365 CTAAGCC
1 CTAAACC
*
12372 CTAAGCC
1 CTAAACC
*
12379 CTAAGCC
1 CTAAACC
*
12386 CTAAGCC
1 CTAAACC
*
12393 CTAAGCC
1 CTAAACC
*
12400 CTAAGCC
1 CTAAACC
*
12407 CTAAGCC
1 CTAAACC
*
12414 CTAAGCC
1 CTAAACC
*
12421 CTAAGCC
1 CTAAACC
*
12428 CTAAGCC
1 CTAAACC
*
12435 CTAAGCC
1 CTAAACC
*
12442 CTAAGCC
1 CTAAACC
*
12449 CTAAGCC
1 CTAAACC
*
12456 CTAAGCC
1 CTAAACC
*
12463 CTAAGCC
1 CTAAACC
*
12470 CTAAGCC
1 CTAAACC
*
12477 CTAAGCC
1 CTAAACC
*
12484 CTAAGCC
1 CTAAACC
*
12491 CTAAGCC
1 CTAAACC
*
12498 CTAAGCC
1 CTAAACC
*
12505 CTAAGCC
1 CTAAACC
*
12512 CTAAGCC
1 CTAAACC
*
12519 CTAAGCC
1 CTAAACC
*
12526 CTAAGCC
1 CTAAACC
*
12533 CTAAGCC
1 CTAAACC
*
12540 CTAAGCC
1 CTAAACC
*
12547 CTAAGCC
1 CTAAACC
*
12554 CTAAGCC
1 CTAAACC
*
12561 CTAAGCC
1 CTAAACC
*
12568 CTAAGCC
1 CTAAACC
*
12575 CTAAGCC
1 CTAAACC
*
12582 CTAAGCC
1 CTAAACC
*
12589 CTAAGCC
1 CTAAACC
*
12596 CTAAGCC
1 CTAAACC
*
12603 CTAAGCC
1 CTAAACC
*
12610 CTAAGCC
1 CTAAACC
*
12617 CTAAGCC
1 CTAAACC
*
12624 CTAAGCC
1 CTAAACC
*
12631 CT-AAGC
1 CTAAACC
*
12637 CTAAGCC
1 CTAAACC
*
12644 CTAAGCC
1 CTAAACC
*
12651 CTAAGCC
1 CTAAACC
*
12658 CTAAGCC
1 CTAAACC
*
12665 CTAAGCC
1 CTAAACC
*
12672 CTAAGCC
1 CTAAACC
*
12679 CTAAGCC
1 CTAAACC
*
12686 CTAAGCC
1 CTAAACC
*
12693 CTAAGCC
1 CTAAACC
*
12700 CTAAGCC
1 CTAAACC
*
12707 CTAAGCC
1 CTAAACC
*
12714 CTAAGCC
1 CTAAACC
*
12721 CTAAGCC
1 CTAAACC
*
12728 CTAAGCC
1 CTAAACC
*
12735 CTAAGCC
1 CTAAACC
*
12742 CTAAGCC
1 CTAAACC
*
12749 CTAAGCC
1 CTAAACC
*
12756 CTAAGCC
1 CTAAACC
*
12763 CTAAGCC
1 CTAAACC
*
12770 CTAAGCC
1 CTAAACC
*
12777 CTAAGCC
1 CTAAACC
*
12784 CTAAGCC
1 CTAAACC
*
12791 CTAAGCC
1 CTAAACC
*
12798 CTAAGCC
1 CTAAACC
*
12805 CTAAGCC
1 CTAAACC
*
12812 CTAAGCC
1 CTAAACC
*
12819 CT-AAGC
1 CTAAACC
*
12825 CTAAGCC
1 CTAAACC
*
12832 CTAAGCC
1 CTAAACC
*
12839 CTAAGCC
1 CTAAACC
*
12846 CTAAGCC
1 CTAAACC
*
12853 CTAAGCC
1 CTAAACC
*
12860 CTAAGCC
1 CTAAACC
*
12867 CTAAGCC
1 CTAAACC
*
12874 CTAAGCC
1 CTAAACC
*
12881 CTAAGCC
1 CTAAACC
*
12888 CTAAGCC
1 CTAAACC
*
12895 CTAAGCC
1 CTAAACC
*
12902 CTAAGCC
1 CTAAACC
*
12909 CTAAGCC
1 CTAAACC
*
12916 CTAAGCC
1 CTAAACC
*
12923 CTAAGCC
1 CTAAACC
12930 CTAAAACC
1 CT-AAACC
*
12938 C-GAACC
1 CTAAACC
*
12944 C-GAACC
1 CTAAACC
**
12950 CCGAACC
1 CTAAACC
**
12957 CCGAACC
1 CTAAACC
*
12964 C-GAACC
1 CTAAACC
12970 CT-AACC
1 CTAAACC
12976 CTAAACC
1 CTAAACC
12983 CTAAACC
1 CTAAACC
12990 CT-AACC
1 CTAAACC
12996 CTAAACC
1 CTAAACC
13003 CTAAACC
1 CTAAACC
13010 CTAAACC
1 CTAAACC
13017 CTAAACC
1 CTAAACC
13024 CTAAACC
1 CTAAACC
13031 CTAAACC
1 CTAAACC
13038 CTAAACC
1 CTAAACC
13045 CTAAACC
1 CTAAACC
13052 CTAAACC
1 CTAAACC
13059 CTAAACC
1 CTAAACC
13066 CTAAACC
1 CTAAACC
13073 CTAAACC
1 CTAAACC
13080 CTAAACC
1 CTAAACC
13087 CTAAACC
1 CTAAACC
13094 CTAAACC
1 CTAAACC
13101 CTAAACC
1 CTAAACC
13108 CTAAACC
1 CTAAACC
13115 CTAAACC
1 CTAAACC
13122 CTAAACC
1 CTAAACC
13129 CTAAACC
1 CTAAACC
13136 CTAAACC
1 CTAAACC
13143 CTAAACC
1 CTAAACC
13150 CTAAACC
1 CTAAACC
13157 CTAAACC
1 CTAAACC
13164 CTAAACC
1 CTAAACC
13171 CTAAACC
1 CTAAACC
13178 CTAAACC
1 CTAAACC
13185 CTAAACC
1 CTAAACC
13192 CTAAACC
1 CTAAACC
13199 CTAAACC
1 CTAAACC
13206 CTAAACC
1 CTAAACC
13213 CTAAACC
1 CTAAACC
13220 CTAAACC
1 CTAAACC
13227 C
1 C
13228 CGAACCCCGA
Statistics
Matches: 12767, Mismatches: 140, Indels: 626
0.94 0.01 0.05
Matches are distributed among these distances:
4 12 0.00
5 114 0.01
6 1365 0.11
7 11070 0.87
8 154 0.01
9 38 0.00
10 14 0.00
ACGTcount: A:0.38, C:0.43, G:0.05, T:0.14
Consensus pattern (7 bp):
CTAAACC
Found at i:13233 original size:7 final size:7
Alignment explanation
Indices: 13223--13263 Score: 82
Period size: 7 Copynumber: 5.9 Consensus size: 7
13213 CTAAACCCTA
13223 AACCCCG
1 AACCCCG
13230 AACCCCG
1 AACCCCG
13237 AACCCCG
1 AACCCCG
13244 AACCCCG
1 AACCCCG
13251 AACCCCG
1 AACCCCG
13258 AACCCC
1 AACCCC
13264 AATATTAACA
Statistics
Matches: 34, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
7 34 1.00
ACGTcount: A:0.29, C:0.59, G:0.12, T:0.00
Consensus pattern (7 bp):
AACCCCG
Found at i:14683 original size:26 final size:25
Alignment explanation
Indices: 14617--14683 Score: 80
Period size: 26 Copynumber: 2.6 Consensus size: 25
14607 ATGTACACAC
* *
14617 AAATATACTATAAGTGACATTTATTG
1 AAATATACCATAA-TGACATGTATTG
*
14643 AAATATATCATTAATGACATGTATTG
1 AAATATACCA-TAATGACATGTATTG
14669 AAATATACCAGTAAT
1 AAATATACCA-TAAT
14684 ATAAAATAGG
Statistics
Matches: 35, Mismatches: 5, Indels: 2
0.83 0.12 0.05
Matches are distributed among these distances:
26 32 0.91
27 3 0.09
ACGTcount: A:0.45, C:0.09, G:0.10, T:0.36
Consensus pattern (25 bp):
AAATATACCATAATGACATGTATTG
Found at i:14986 original size:22 final size:22
Alignment explanation
Indices: 14943--14983 Score: 59
Period size: 22 Copynumber: 1.9 Consensus size: 22
14933 AAAATATATG
14943 AAAATAAATTATCTTTAAAATT
1 AAAATAAATTATCTTTAAAATT
14965 AAAATAATATT-T-TTTAAAA
1 AAAATAA-ATTATCTTTAAAA
14984 ATTTAGTTAT
Statistics
Matches: 18, Mismatches: 0, Indels: 3
0.86 0.00 0.14
Matches are distributed among these distances:
21 7 0.39
22 8 0.44
23 3 0.17
ACGTcount: A:0.56, C:0.02, G:0.00, T:0.41
Consensus pattern (22 bp):
AAAATAAATTATCTTTAAAATT
Found at i:24677 original size:108 final size:108
Alignment explanation
Indices: 24558--24768 Score: 359
Period size: 108 Copynumber: 2.0 Consensus size: 108
24548 TGAGGCCATA
* * * * *
24558 AAAAAAGACCATGACAGTATAGATGGAAATGTTCTTATTCCATTTGCTAGTCATACCGGAGAACC
1 AAAAAAGACCATGACAGGATAGATGGAAATGTTATTAATCCATTTGCTAATCATACCGAAGAACC
24623 CTCACAAACTAAGGAGGGGAATGAAGATTTTAGTAGGCCCAAC
66 CTCACAAACTAAGGAGGGGAATGAAGATTTTAGTAGGCCCAAC
*
24666 AAAAAAGACCATGACAGGATAGATGGAAATGTTATTAATCCATTTGCTAATCATACCGAAGTACC
1 AAAAAAGACCATGACAGGATAGATGGAAATGTTATTAATCCATTTGCTAATCATACCGAAGAACC
*
24731 CTCTCAAACTAAGGAGGGGAATGAAGATTTTAGTAGGC
66 CTCACAAACTAAGGAGGGGAATGAAGATTTTAGTAGGC
24769 TCAAGAATGT
Statistics
Matches: 96, Mismatches: 7, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
108 96 1.00
ACGTcount: A:0.38, C:0.17, G:0.21, T:0.24
Consensus pattern (108 bp):
AAAAAAGACCATGACAGGATAGATGGAAATGTTATTAATCCATTTGCTAATCATACCGAAGAACC
CTCACAAACTAAGGAGGGGAATGAAGATTTTAGTAGGCCCAAC
Found at i:31694 original size:6 final size:6
Alignment explanation
Indices: 31683--31713 Score: 62
Period size: 6 Copynumber: 5.2 Consensus size: 6
31673 TGGTGCCTCA
31683 TGCTCC TGCTCC TGCTCC TGCTCC TGCTCC T
1 TGCTCC TGCTCC TGCTCC TGCTCC TGCTCC T
31714 ACTGAAGGGA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 25 1.00
ACGTcount: A:0.00, C:0.48, G:0.16, T:0.35
Consensus pattern (6 bp):
TGCTCC
Found at i:39728 original size:31 final size:31
Alignment explanation
Indices: 39690--39776 Score: 165
Period size: 31 Copynumber: 2.8 Consensus size: 31
39680 CCAGATACTA
*
39690 GTCAAATTTGCATTCAGATAATGCACAATAT
1 GTCAAATTTGCATTTAGATAATGCACAATAT
39721 GTCAAATTTGCATTTAGATAATGCACAATAT
1 GTCAAATTTGCATTTAGATAATGCACAATAT
39752 GTCAAATTTGCATTTAGATAATGCA
1 GTCAAATTTGCATTTAGATAATGCA
39777 TAGCATGCCA
Statistics
Matches: 55, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
31 55 1.00
ACGTcount: A:0.38, C:0.14, G:0.14, T:0.34
Consensus pattern (31 bp):
GTCAAATTTGCATTTAGATAATGCACAATAT
Found at i:40803 original size:19 final size:19
Alignment explanation
Indices: 40781--40831 Score: 84
Period size: 19 Copynumber: 2.7 Consensus size: 19
40771 CCATTCAGAC
40781 TGCGGTTTACCACCCGGTG
1 TGCGGTTTACCACCCGGTG
*
40800 TGCGGTTTACCACCCGTTG
1 TGCGGTTTACCACCCGGTG
*
40819 TGCGGTTTCCCAC
1 TGCGGTTTACCAC
40832 TTAAAAACTC
Statistics
Matches: 30, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
19 30 1.00
ACGTcount: A:0.10, C:0.33, G:0.27, T:0.29
Consensus pattern (19 bp):
TGCGGTTTACCACCCGGTG
Found at i:44493 original size:40 final size:36
Alignment explanation
Indices: 44449--44534 Score: 91
Period size: 36 Copynumber: 2.3 Consensus size: 36
44439 ACCCGACTCG
* *
44449 ATAAATATTAAAATAATTATTATATATATATATAATATTA
1 ATAAAT-TTAAAATAA--ATTA-AAAAATATATAATATTA
* *
44489 ATAAATTTAAATTAAATTAAAAAATATATAATATTT
1 ATAAATTTAAAATAAATTAAAAAATATATAATATTA
*
44525 ATATATTTAA
1 ATAAATTTAA
44535 TTTAAATATA
Statistics
Matches: 41, Mismatches: 5, Indels: 4
0.82 0.10 0.08
Matches are distributed among these distances:
36 23 0.56
37 4 0.10
39 8 0.20
40 6 0.15
ACGTcount: A:0.56, C:0.00, G:0.00, T:0.44
Consensus pattern (36 bp):
ATAAATTTAAAATAAATTAAAAAATATATAATATTA
Found at i:50786 original size:3 final size:3
Alignment explanation
Indices: 50778--50814 Score: 74
Period size: 3 Copynumber: 12.3 Consensus size: 3
50768 TTAATCCGAG
50778 ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA A
1 ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA ATA A
50815 ATATTATTAT
Statistics
Matches: 34, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 34 1.00
ACGTcount: A:0.68, C:0.00, G:0.00, T:0.32
Consensus pattern (3 bp):
ATA
Found at i:54988 original size:130 final size:130
Alignment explanation
Indices: 54840--55101 Score: 445
Period size: 130 Copynumber: 2.0 Consensus size: 130
54830 CCCATTAATA
54840 TAAAATTAAATAAAAATCAATTATAACAAAAAAATTACTAAAAACATAACATTTTAAAATAAATA
1 TAAAATTAAATAAAAATCAATTATAACAAAAAAATTACTAAAAACATAACATTTTAAAATAAATA
* *
54905 GAATGACATTTGAAGTAGACAT-AAAAAATACATTTTAAAGATTTTTCTTAACAATTCATATAAA
66 GAATAACATTTGAAGTAGAAATAAAAAAATACATTTTAAAGATTTTT-TTAACAATTCATATAAA
54969 T
130 T
* *
54970 TAAAATTAAATAAAAATCAATTATAACAAAAAAATTACTAAAAGCATAACATTTTAAAATAAATT
1 TAAAATTAAATAAAAATCAATTATAACAAAAAAATTACTAAAAACATAACATTTTAAAATAAATA
* *
55035 GAATAACATTTGAAGTAGAAATAAAAAAAATACATTTTTAATATTTTTTTAACAATTCATATAAA
66 GAATAACATTTGAAGTAGAAAT-AAAAAAATACATTTTAAAGATTTTTTTAACAATTCATATAAA
55100 T
130 T
55101 T
1 T
55102 GTATAACTAT
Statistics
Matches: 124, Mismatches: 6, Indels: 3
0.93 0.05 0.02
Matches are distributed among these distances:
130 83 0.67
131 19 0.15
132 22 0.18
ACGTcount: A:0.55, C:0.08, G:0.04, T:0.33
Consensus pattern (130 bp):
TAAAATTAAATAAAAATCAATTATAACAAAAAAATTACTAAAAACATAACATTTTAAAATAAATA
GAATAACATTTGAAGTAGAAATAAAAAAATACATTTTAAAGATTTTTTTAACAATTCATATAAAT
Found at i:65898 original size:23 final size:23
Alignment explanation
Indices: 65837--65912 Score: 57
Period size: 23 Copynumber: 3.2 Consensus size: 23
65827 CGGTATATAT
*
65837 ATATACTTATGTATATATACTTGT-
1 ATATACTTA--TATATATACTTATG
* * *
65861 ATAAATCATACATATATACTTATG
1 ATATA-CTTATATATATACTTATG
*
65885 ATATACTTATATATTATACCTATG
1 ATATACTTATATA-TATACTTATG
65909 -TATA
1 ATATA
65913 GATAGTTTTA
Statistics
Matches: 41, Mismatches: 8, Indels: 7
0.73 0.14 0.12
Matches are distributed among these distances:
23 21 0.51
24 17 0.41
25 3 0.07
ACGTcount: A:0.39, C:0.11, G:0.05, T:0.45
Consensus pattern (23 bp):
ATATACTTATATATATACTTATG
Found at i:65975 original size:18 final size:17
Alignment explanation
Indices: 65949--66044 Score: 72
Period size: 18 Copynumber: 5.4 Consensus size: 17
65939 TGTGTGTAAT
65949 TATATATATAGGTATAAG
1 TATATATATA-GTATAAG
*
65967 TATACATAT-GTATAAG
1 TATATATATAGTATAAG
*
65983 TATATATATACTTATAAG
1 TATATATATA-GTATAAG
*
66001 TATAATGTATAGTTATATA-
1 TAT-ATATATAG-TATA-AG
66020 TATTATATATTTA-TATAAG
1 TA-TATATA--TAGTATAAG
66039 TATATA
1 TATATA
66045 CTTATAATGT
Statistics
Matches: 63, Mismatches: 6, Indels: 18
0.72 0.07 0.21
Matches are distributed among these distances:
16 15 0.24
18 22 0.35
19 22 0.35
20 2 0.03
21 2 0.03
ACGTcount: A:0.44, C:0.02, G:0.09, T:0.45
Consensus pattern (17 bp):
TATATATATAGTATAAG
Found at i:65979 original size:16 final size:16
Alignment explanation
Indices: 65960--65991 Score: 55
Period size: 16 Copynumber: 2.0 Consensus size: 16
65950 ATATATATAG
65960 GTATAAGTATACATAT
1 GTATAAGTATACATAT
*
65976 GTATAAGTATATATAT
1 GTATAAGTATACATAT
65992 ACTTATAAGT
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
16 15 1.00
ACGTcount: A:0.44, C:0.03, G:0.12, T:0.41
Consensus pattern (16 bp):
GTATAAGTATACATAT
Found at i:66004 original size:16 final size:15
Alignment explanation
Indices: 65951--66044 Score: 51
Period size: 16 Copynumber: 6.4 Consensus size: 15
65941 TGTGTAATTA
*
65951 TATATATAGGTATAAG
1 TATATATA-TTATAAG
*
65967 TATACATATGTATAAG
1 TATATATAT-TATAAG
65983 TATATATATACTTATAAG
1 --TATATATA-TTATAAG
*
66001 TATA-AT-GTAT-AG
1 TATATATATTATAAG
66013 TTATATATATTAT-A-
1 -TATATATATTATAAG
66027 TAT-T-TA-TATAAG
1 TATATATATTATAAG
66039 TATATA
1 TATATA
66045 CTTATAATGT
Statistics
Matches: 62, Mismatches: 5, Indels: 24
0.68 0.05 0.26
Matches are distributed among these distances:
10 3 0.05
11 3 0.05
12 6 0.10
13 11 0.18
14 2 0.03
15 6 0.10
16 17 0.27
18 13 0.21
19 1 0.02
ACGTcount: A:0.44, C:0.02, G:0.10, T:0.45
Consensus pattern (15 bp):
TATATATATTATAAG
Found at i:69320 original size:18 final size:18
Alignment explanation
Indices: 69297--69332 Score: 72
Period size: 18 Copynumber: 2.0 Consensus size: 18
69287 ACTATAACCC
69297 AAAGTATCGATACTCTTG
1 AAAGTATCGATACTCTTG
69315 AAAGTATCGATACTCTTG
1 AAAGTATCGATACTCTTG
69333 TTCAGAAACT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
18 18 1.00
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Consensus pattern (18 bp):
AAAGTATCGATACTCTTG
Found at i:70479 original size:28 final size:29
Alignment explanation
Indices: 70448--70513 Score: 89
Period size: 29 Copynumber: 2.3 Consensus size: 29
70438 CCATCATTAC
* **
70448 TTTCAAGTACTGACTC-AATGTCATAATG
1 TTTCAAGCACTGACTCAAACATCATAATG
*
70476 TTTCAAGCAGTGACTCAAACATCATAATG
1 TTTCAAGCACTGACTCAAACATCATAATG
70505 TTTCAAGCA
1 TTTCAAGCA
70514 TTGGTTCGAC
Statistics
Matches: 33, Mismatches: 4, Indels: 1
0.87 0.11 0.03
Matches are distributed among these distances:
28 14 0.42
29 19 0.58
ACGTcount: A:0.35, C:0.20, G:0.14, T:0.32
Consensus pattern (29 bp):
TTTCAAGCACTGACTCAAACATCATAATG
Found at i:72264 original size:2 final size:2
Alignment explanation
Indices: 72259--72290 Score: 64
Period size: 2 Copynumber: 16.0 Consensus size: 2
72249 TTCATATGTG
72259 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
72291 CACATAAAAT
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 30 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:74048 original size:45 final size:45
Alignment explanation
Indices: 73990--74246 Score: 374
Period size: 45 Copynumber: 5.8 Consensus size: 45
73980 ATCAACATAT
* *
73990 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATTTAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
* * *
74035 TTACTATTTATCCCATAAGCTCATAAGCTTATTTT-GCAATATAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
** * * *
74079 TTATTATTTAGCTCATAAGCTCGTAAGCTTATTTTACCAGTATAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
74124 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
**
74169 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACTGATATAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
* *
74214 TTACCATTTA-CCCATAAGCACGTAAGTTTATTT
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTT
74247 GCATGCTTAC
Statistics
Matches: 193, Mismatches: 18, Indels: 3
0.90 0.08 0.01
Matches are distributed among these distances:
44 59 0.31
45 134 0.69
ACGTcount: A:0.30, C:0.21, G:0.08, T:0.40
Consensus pattern (45 bp):
TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
Found at i:74125 original size:89 final size:90
Alignment explanation
Indices: 73990--74246 Score: 376
Period size: 89 Copynumber: 2.9 Consensus size: 90
73980 ATCAACATAT
* * *
73990 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATTTACTTACTATTTATCCCATAAGC
1 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAGTATACTTACCATTTATCCCATAAGC
* *
74055 TCATAAGCTTATTTT-GCAATATAC
66 TCGTAAGCTTATTTTACCAATATAC
* * *
74079 TTATTATTTAGCTCATAAGCTCGTAAGCTTATTTTACCAGTATACTTACCATTTATCCCATAAGC
1 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAGTATACTTACCATTTATCCCATAAGC
74144 TCGTAAGCTTATTTTACCAATATAC
66 TCGTAAGCTTATTTTACCAATATAC
* *
74169 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTA-CTGATATACTTACCATTTA-CCCATAAG
1 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAG-TATACTTACCATTTATCCCATAAG
* *
74232 CACGTAAGTTTATTT
65 CTCGTAAGCTTATTT
74247 GCATGCTTAC
Statistics
Matches: 151, Mismatches: 15, Indels: 4
0.89 0.09 0.02
Matches are distributed among these distances:
89 96 0.64
90 55 0.36
ACGTcount: A:0.30, C:0.21, G:0.08, T:0.40
Consensus pattern (90 bp):
TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAGTATACTTACCATTTATCCCATAAGC
TCGTAAGCTTATTTTACCAATATAC
Found at i:74157 original size:25 final size:25
Alignment explanation
Indices: 74129--74202 Score: 63
Period size: 25 Copynumber: 3.2 Consensus size: 25
74119 TATACTTACC
74129 ATTTATCCCATAAGCTCGTAAGCTT
1 ATTTATCCCATAAGCTCGTAAGCTT
* *
74154 ATTT-TACCAATATA-CT--T-A-C-C
1 ATTTAT-CCCATA-AGCTCGTAAGCTT
74174 ATTTATCCCATAAGCTCGTAAGCTT
1 ATTTATCCCATAAGCTCGTAAGCTT
74199 ATTT
1 ATTT
74203 TACTGATATA
Statistics
Matches: 36, Mismatches: 4, Indels: 18
0.62 0.07 0.31
Matches are distributed among these distances:
19 1 0.03
20 11 0.31
21 2 0.06
22 2 0.06
23 2 0.06
24 2 0.06
25 15 0.42
26 1 0.03
ACGTcount: A:0.30, C:0.23, G:0.08, T:0.39
Consensus pattern (25 bp):
ATTTATCCCATAAGCTCGTAAGCTT
Found at i:74160 original size:134 final size:134
Alignment explanation
Indices: 73990--74246 Score: 399
Period size: 134 Copynumber: 1.9 Consensus size: 134
73980 ATCAACATAT
* * *
73990 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATTTACTTACTATTTATCCCATAAGC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATACTTACCATTTATCCCATAAGC
* ** * *
74055 TCATAAGCTTATTTTGC-AATATACTTATTATTTAGCTCATAAGCTCGTAAGCTTATTTTACCAG
66 TCATAAGCTTATTTTACTAATATACTTACCATTTA-CCCATAAGCACGTAAGCTTATTTTACCAG
74119 TATAC
130 TATAC
74124 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATACTTACCATTTATCCCATAAGC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATACTTACCATTTATCCCATAAGC
* * *
74189 TCGTAAGCTTATTTTACTGATATACTTACCATTTACCCATAAGCACGTAAGTTTATTT
66 TCATAAGCTTATTTTACTAATATACTTACCATTTACCCATAAGCACGTAAGCTTATTT
74247 GCATGCTTAC
Statistics
Matches: 111, Mismatches: 11, Indels: 2
0.90 0.09 0.02
Matches are distributed among these distances:
134 97 0.87
135 14 0.13
ACGTcount: A:0.30, C:0.21, G:0.08, T:0.40
Consensus pattern (134 bp):
TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATACTTACCATTTATCCCATAAGC
TCATAAGCTTATTTTACTAATATACTTACCATTTACCCATAAGCACGTAAGCTTATTTTACCAGT
ATAC
Found at i:74809 original size:24 final size:24
Alignment explanation
Indices: 74777--74822 Score: 92
Period size: 24 Copynumber: 1.9 Consensus size: 24
74767 ATTCCTGATT
74777 ATGTATAAAACATCTATGTACATA
1 ATGTATAAAACATCTATGTACATA
74801 ATGTATAAAACATCTATGTACA
1 ATGTATAAAACATCTATGTACA
74823 ATGTCATGCA
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
24 22 1.00
ACGTcount: A:0.46, C:0.13, G:0.09, T:0.33
Consensus pattern (24 bp):
ATGTATAAAACATCTATGTACATA
Found at i:76411 original size:23 final size:23
Alignment explanation
Indices: 76350--76425 Score: 57
Period size: 23 Copynumber: 3.2 Consensus size: 23
76340 CGGTATATAT
*
76350 ATATACTTATGTATATATACTTGT-
1 ATATACTTA--TATATATACTTATG
* * *
76374 ATAAATCATACATATATACTTATG
1 ATATA-CTTATATATATACTTATG
*
76398 ATATACTTATATATTATACCTATG
1 ATATACTTATATA-TATACTTATG
76422 -TATA
1 ATATA
76426 GATAGTTTTA
Statistics
Matches: 41, Mismatches: 8, Indels: 7
0.73 0.14 0.12
Matches are distributed among these distances:
23 21 0.51
24 17 0.41
25 3 0.07
ACGTcount: A:0.39, C:0.11, G:0.05, T:0.45
Consensus pattern (23 bp):
ATATACTTATATATATACTTATG
Found at i:76488 original size:18 final size:17
Alignment explanation
Indices: 76462--76557 Score: 72
Period size: 18 Copynumber: 5.4 Consensus size: 17
76452 TGTGTGTAAT
76462 TATATATATAGGTATAAG
1 TATATATATA-GTATAAG
*
76480 TATACATAT-GTATAAG
1 TATATATATAGTATAAG
*
76496 TATATATATACTTATAAG
1 TATATATATA-GTATAAG
*
76514 TATAATGTATAGTTATATA-
1 TAT-ATATATAG-TATA-AG
76533 TATTATATATTTA-TATAAG
1 TA-TATATA--TAGTATAAG
76552 TATATA
1 TATATA
76558 CTTATAATGT
Statistics
Matches: 63, Mismatches: 6, Indels: 18
0.72 0.07 0.21
Matches are distributed among these distances:
16 15 0.24
18 22 0.35
19 22 0.35
20 2 0.03
21 2 0.03
ACGTcount: A:0.44, C:0.02, G:0.09, T:0.45
Consensus pattern (17 bp):
TATATATATAGTATAAG
Found at i:76492 original size:16 final size:16
Alignment explanation
Indices: 76473--76504 Score: 55
Period size: 16 Copynumber: 2.0 Consensus size: 16
76463 ATATATATAG
76473 GTATAAGTATACATAT
1 GTATAAGTATACATAT
*
76489 GTATAAGTATATATAT
1 GTATAAGTATACATAT
76505 ACTTATAAGT
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
16 15 1.00
ACGTcount: A:0.44, C:0.03, G:0.12, T:0.41
Consensus pattern (16 bp):
GTATAAGTATACATAT
Found at i:76517 original size:16 final size:15
Alignment explanation
Indices: 76464--76557 Score: 51
Period size: 16 Copynumber: 6.4 Consensus size: 15
76454 TGTGTAATTA
*
76464 TATATATAGGTATAAG
1 TATATATA-TTATAAG
*
76480 TATACATATGTATAAG
1 TATATATAT-TATAAG
76496 TATATATATACTTATAAG
1 --TATATATA-TTATAAG
*
76514 TATA-AT-GTAT-AG
1 TATATATATTATAAG
76526 TTATATATATTAT-A-
1 -TATATATATTATAAG
76540 TAT-T-TA-TATAAG
1 TATATATATTATAAG
76552 TATATA
1 TATATA
76558 CTTATAATGT
Statistics
Matches: 62, Mismatches: 5, Indels: 24
0.68 0.05 0.26
Matches are distributed among these distances:
10 3 0.05
11 3 0.05
12 6 0.10
13 11 0.18
14 2 0.03
15 6 0.10
16 17 0.27
18 13 0.21
19 1 0.02
ACGTcount: A:0.44, C:0.02, G:0.10, T:0.45
Consensus pattern (15 bp):
TATATATATTATAAG
Found at i:80690 original size:2 final size:2
Alignment explanation
Indices: 80683--80715 Score: 66
Period size: 2 Copynumber: 16.5 Consensus size: 2
80673 AAGAATATGA
80683 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
80716 GCAGTATATG
Statistics
Matches: 31, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 31 1.00
ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48
Consensus pattern (2 bp):
AT
Found at i:82841 original size:18 final size:18
Alignment explanation
Indices: 82818--82853 Score: 72
Period size: 18 Copynumber: 2.0 Consensus size: 18
82808 ACTATGACCC
82818 AAAGTATCGATACTCTTG
1 AAAGTATCGATACTCTTG
82836 AAAGTATCGATACTCTTG
1 AAAGTATCGATACTCTTG
82854 TTCAGAAACT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
18 18 1.00
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Consensus pattern (18 bp):
AAAGTATCGATACTCTTG
Found at i:84000 original size:28 final size:29
Alignment explanation
Indices: 83969--84034 Score: 89
Period size: 29 Copynumber: 2.3 Consensus size: 29
83959 CCATCATTAC
* **
83969 TTTCAAGTACTGACTC-AATGTCATAATG
1 TTTCAAGCACTGACTCAAACATCATAATG
*
83997 TTTCAAGCAGTGACTCAAACATCATAATG
1 TTTCAAGCACTGACTCAAACATCATAATG
84026 TTTCAAGCA
1 TTTCAAGCA
84035 TTGGTTCGAC
Statistics
Matches: 33, Mismatches: 4, Indels: 1
0.87 0.11 0.03
Matches are distributed among these distances:
28 14 0.42
29 19 0.58
ACGTcount: A:0.35, C:0.20, G:0.14, T:0.32
Consensus pattern (29 bp):
TTTCAAGCACTGACTCAAACATCATAATG
Found at i:88097 original size:45 final size:45
Alignment explanation
Indices: 88039--88295 Score: 376
Period size: 45 Copynumber: 5.8 Consensus size: 45
88029 ATCAACATAT
* *
88039 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATTTAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
* * *
88084 TTACTATTTATCCCATAAGCTCATAAGCTTATTTT-GCAATATAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
** * * *
88128 TTATTATTTAGCTCATAAGCTCGTAAGCTTATTTTACCAGTATAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
88173 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
*
88218 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCGATATAC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
*
88263 TTACCATTTA-CCCATAAGCAT-GTAAGTTTATTT
1 TTACCATTTATCCCATAAGC-TCGTAAGCTTATTT
88296 GCATGCTTAC
Statistics
Matches: 194, Mismatches: 16, Indels: 5
0.90 0.07 0.02
Matches are distributed among these distances:
44 58 0.30
45 136 0.70
ACGTcount: A:0.30, C:0.21, G:0.08, T:0.40
Consensus pattern (45 bp):
TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATAC
Found at i:88174 original size:89 final size:90
Alignment explanation
Indices: 88039--88281 Score: 375
Period size: 89 Copynumber: 2.7 Consensus size: 90
88029 ATCAACATAT
* * *
88039 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATTTACTTACTATTTATCCCATAAGC
1 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAGTATACTTACCATTTATCCCATAAGC
*
88104 TCATAAGCTTATTTT-GCAATATAC
66 TCATAAGCTTATTTTACCAATATAC
* * *
88128 TTATTATTTAGCTCATAAGCTCGTAAGCTTATTTTACCAGTATACTTACCATTTATCCCATAAGC
1 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAGTATACTTACCATTTATCCCATAAGC
*
88193 TCGTAAGCTTATTTTACCAATATAC
66 TCATAAGCTTATTTTACCAATATAC
*
88218 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACC-GATATACTTACCATTTA-CCCATAAG
1 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAG-TATACTTACCATTTATCCCATAAG
88281 C
65 C
88282 ATGTAAGTTT
Statistics
Matches: 140, Mismatches: 12, Indels: 4
0.90 0.08 0.03
Matches are distributed among these distances:
89 83 0.59
90 57 0.41
ACGTcount: A:0.30, C:0.23, G:0.08, T:0.40
Consensus pattern (90 bp):
TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAGTATACTTACCATTTATCCCATAAGC
TCATAAGCTTATTTTACCAATATAC
Found at i:88206 original size:25 final size:25
Alignment explanation
Indices: 88178--88251 Score: 63
Period size: 25 Copynumber: 3.2 Consensus size: 25
88168 TATACTTACC
88178 ATTTATCCCATAAGCTCGTAAGCTT
1 ATTTATCCCATAAGCTCGTAAGCTT
* *
88203 ATTT-TACCAATATA-CT--T-A-C-C
1 ATTTAT-CCCATA-AGCTCGTAAGCTT
88223 ATTTATCCCATAAGCTCGTAAGCTT
1 ATTTATCCCATAAGCTCGTAAGCTT
88248 ATTT
1 ATTT
88252 TACCGATATA
Statistics
Matches: 36, Mismatches: 4, Indels: 18
0.62 0.07 0.31
Matches are distributed among these distances:
19 1 0.03
20 11 0.31
21 2 0.06
22 2 0.06
23 2 0.06
24 2 0.06
25 15 0.42
26 1 0.03
ACGTcount: A:0.30, C:0.23, G:0.08, T:0.39
Consensus pattern (25 bp):
ATTTATCCCATAAGCTCGTAAGCTT
Found at i:88288 original size:134 final size:134
Alignment explanation
Indices: 88039--88295 Score: 392
Period size: 134 Copynumber: 1.9 Consensus size: 134
88029 ATCAACATAT
* * *
88039 TTACTATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATTTACTTACTATTTATCCCATAAGC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATACTTACCATTTATCCCATAAGC
* ** *
88104 TCATAAGCTTATTTTGCAATATACTTATTATTTAGCTCATAAGCTCGTAAGCTTATTTTACCAGT
66 TCATAAGCTTATTTTCCAATATACTTACCATTTAGCCCATAAGCTCGTAAGCTTATTTTACCAGT
88169 ATAC
131 ATAC
88173 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATACTTACCATTTATCCCATAAGC
1 TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATACTTACCATTTATCCCATAAGC
* * *
88238 TCGTAAGCTTATTTTACCGATATACTTACCATTTA-CCCATAAGCAT-GTAAGTTTATTT
66 TCATAAGCTTATTTT-CCAATATACTTACCATTTAGCCCATAAGC-TCGTAAGCTTATTT
88296 GCATGCTTAC
Statistics
Matches: 111, Mismatches: 10, Indels: 4
0.89 0.08 0.03
Matches are distributed among these distances:
134 95 0.86
135 16 0.14
ACGTcount: A:0.30, C:0.21, G:0.08, T:0.40
Consensus pattern (134 bp):
TTACCATTTATCCCATAAGCTCGTAAGCTTATTTTACCAATATACTTACCATTTATCCCATAAGC
TCATAAGCTTATTTTCCAATATACTTACCATTTAGCCCATAAGCTCGTAAGCTTATTTTACCAGT
ATAC
Found at i:88858 original size:24 final size:24
Alignment explanation
Indices: 88826--88871 Score: 92
Period size: 24 Copynumber: 1.9 Consensus size: 24
88816 ATTCCTGATT
88826 ATGTATAAAACATCTATGTACATA
1 ATGTATAAAACATCTATGTACATA
88850 ATGTATAAAACATCTATGTACA
1 ATGTATAAAACATCTATGTACA
88872 ATGTCATGCA
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
24 22 1.00
ACGTcount: A:0.46, C:0.13, G:0.09, T:0.33
Consensus pattern (24 bp):
ATGTATAAAACATCTATGTACATA
Found at i:93734 original size:713 final size:706
Alignment explanation
Indices: 92362--93731 Score: 1609
Period size: 706 Copynumber: 1.9 Consensus size: 706
92352 AAAAGTTTCA
* * * *
92362 AATTTTTTTCTTATCCTCTCTGTTGTTTACCCCCACTCGATAATAAAAAGGACGATCATCTTCTA
1 AATTTTTTTCTTATCCTCTCTATTATTCACCCCCACCCGATAATAAAAAGGACGATCATCTTCTA
* * *
92427 TTCTACTACCTCAATATTACGTTTGATTTGTTGAGGGAGAAAATCTTCATTTTCTTTGATATTTT
66 TTCTACTACCTCAATATTACGTTTGATTTGCTGAGGGAGAAAATATTCATTTTCTCTGATATTTT
* * *
92492 CTTTAATTTTTTTATCTTGCATGTAAGAGCAAAGAGGAAAGATTGTCATCTTTTGCAATCAGGGA
131 CTTTAATTTTTTTATCTTGCATGTAAGAACAAAGAGGAAAGATTGCCATCTTTTGCAATCAGAGA
* * * **
92557 AACCAAGGCCTATGTCCTGCTCTGTTACGACAGAGAGGGACAAACAACCTCTTCAAATTCTTGGG
196 AACCAAGGCCTATGTCCTGCACTGTTACGACAAAGAGGGACAAACAACCGCTTCAAACGCTTGGG
* * * * *
92622 GCAGTCGAGGCACGAGCGTGTGGATCAGACTCACGAGCGCATGAGGTAGCTGGAGAGGCACGCGT
261 GCAGTCAAGGCACGAGCGCGTGGATCAGACTCACGAGCACATGAGGCAGCTGGAGAGGCACACG-
* *
92687 GTGATGCATGTTCAAATTCAAACGGTCTGATGTTCTTGGGTGAAGTTGGGCCGTTAGATCGCTGA
325 GTGA--CA-GTT--AA-TCAAACGGTCTAATGTTCTTGGGTAAAGTTGGGCCGTTAGATCGCTGA
* * * *
92752 TCGGATCCAACAGCTGTGAGTCTTTGATGGTGGTAGCTGATGTATCATTAGGGTAATAACCCTAG
384 TCGGATCCAACAGCTGTGAGTCATTGACGGTGGGAGCTGATGTATCATTAGGGTAAAAACCCTAG
* * * * *
92817 TTGATCCAGATATGGATCGTTCGATGGGTCCATATCTGACAATCCAAATCGAGCGATGACTAGGC
449 TTGATCCAGATATGGACCGTTCGATGGGTCCAAATCTAACAATCCAAATCGAGCGACGACTAGGA
* * * * * * * *
92882 GGGGGAAAACTAGGGTTTCTTTTAATCCCTAACAACTTGGGCTATATCTGGGTTTGGGCTTGCTT
514 AGAGGAAAACTAGGGTTTCCTTTAAACCCTAACAACTTGGGCTACATCCGAGTTTAGGCTTGCTT
* * * *
92947 ATTGGGTCGTTTATAACTATTTTGTAATCTGAGCCTGTAAGATGTTAAATTTTAATTTCATTATA
579 ATTGGGTCGTTTATAACTATTTTGTAATATGAGCATGTAACATGTTAAATTTAAATTTCATTATA
93012 TATATATATATATTCGTATAATAATAATATTAATATATATTACGTTTGATTTCGAAAAGTCCC
644 TATATATATATATTCGTATAATAATAATATTAATATATATTACGTTTGATTTCGAAAAGTCCC
* * * * * *
93075 AATTTTTTTGTTCTCCTCTCTATTATTCACCCTCACCCGATAATAAAGAGGATGATCTTCTTCTA
1 AATTTTTTTCTTATCCTCTCTATTATTCACCCCCACCCGATAATAAAAAGGACGATCATCTTCTA
* * *
93140 TTTTGCTACCTCGATATTACGTTTGATTTGCTGAGGGAGAAAATATTCATTTTCTCTGATATTTT
66 TTCTACTACCTCAATATTACGTTTGATTTGCTGAGGGAGAAAATATTCATTTTCTCTGATATTTT
* * * * *
93205 CTTTTA-TTTTTTGTCTTGCATGTGAGAACAAAGAGGAAAGATTGCCATC-TTTGCAGTCAGAGC
131 CTTTAATTTTTTTATCTTGCATGTAAGAACAAAGAGGAAAGATTGCCATCTTTTGCAATCAGAGA
* * ** * ** *
93268 AACCTAGGCCTCTGTCCTGCACTGTTACGGTAAAG-GGGACAAATAGTCGCTTCAGACGCTTGGG
196 AACCAAGGCCTATGTCCTGCACTGTTACGACAAAGAGGGACAAACAACCGCTTCAAACGCTTGGG
* * * * *
93332 GCAGTCAAGGCAGTCGAGGCATGGACGCGTGGATCAGACTCTCG-GACACGTGGGGCATCTGGGG
261 GCAGTCAAGGCA--C---G-A--G-CGCGTGGATCAGACTCACGAG-CACATGAGGCAGCTGGAG
* * * *
93396 AGGCACAC-GTGA-A-TT-A-C-AATGGTCTAATGTTCTTGGGTAAAGTTGGGTCGTTGGATCGT
316 AGGCACACGGTGACAGTTAATCAAACGGTCTAATGTTCTTGGGTAAAGTTGGGCCGTTAGATCGC
* * *
93455 TGATCGGATCCAACGGTTGTGA-TACATTGACGGTGGCGA-CTGATGTATCATTAGGGTAAAAAT
381 TGATCGGATCCAACAGCTGTGAGT-CATTGACGGTGG-GAGCTGATGTATCATTAGGGTAAAAAC
* * * * ** * * *
93518 CGTAGTTGATCTAGATCTGGACCGTTTGATGGGTCCAAATCTAACGGTCCAGATCGTGCTG-CGG
444 CCTAGTTGATCCAGATATGGACCGTTCGATGGGTCCAAATCTAACAATCCAAATCGAGC-GACGA
* *
93582 CTA-GAAGAGGAAAACTAGGGTTTCCTTTAAACCCTAACAGCTTGGGCTGCATCCGAGTTTAGGC
508 CTAGGAAGAGGAAAACTAGGGTTTCCTTTAAACCCTAACAACTTGGGCTACATCCGAGTTTAGGC
* *
93646 TTGCTTGTTGGGTCGTTTGTAACTATTTTGTAATATCG-GCATGTAACATGTTAAATTTAAATTT
573 TTGCTTATTGGGTCGTTTATAACTATTTTGTAATAT-GAGCATGTAACATGTTAAATTTAAATTT
*
93710 AAGCTTATATATATATATATAT
637 CA--TTATATATATATATATAT
93732 ATAACATAAC
Statistics
Matches: 550, Mismatches: 91, Indels: 38
0.81 0.13 0.06
Matches are distributed among these distances:
705 108 0.20
706 141 0.26
707 21 0.04
709 1 0.00
710 33 0.06
711 40 0.07
712 42 0.08
713 119 0.22
714 1 0.00
715 1 0.00
716 1 0.00
717 4 0.01
718 2 0.00
719 36 0.07
ACGTcount: A:0.26, C:0.18, G:0.23, T:0.33
Consensus pattern (706 bp):
AATTTTTTTCTTATCCTCTCTATTATTCACCCCCACCCGATAATAAAAAGGACGATCATCTTCTA
TTCTACTACCTCAATATTACGTTTGATTTGCTGAGGGAGAAAATATTCATTTTCTCTGATATTTT
CTTTAATTTTTTTATCTTGCATGTAAGAACAAAGAGGAAAGATTGCCATCTTTTGCAATCAGAGA
AACCAAGGCCTATGTCCTGCACTGTTACGACAAAGAGGGACAAACAACCGCTTCAAACGCTTGGG
GCAGTCAAGGCACGAGCGCGTGGATCAGACTCACGAGCACATGAGGCAGCTGGAGAGGCACACGG
TGACAGTTAATCAAACGGTCTAATGTTCTTGGGTAAAGTTGGGCCGTTAGATCGCTGATCGGATC
CAACAGCTGTGAGTCATTGACGGTGGGAGCTGATGTATCATTAGGGTAAAAACCCTAGTTGATCC
AGATATGGACCGTTCGATGGGTCCAAATCTAACAATCCAAATCGAGCGACGACTAGGAAGAGGAA
AACTAGGGTTTCCTTTAAACCCTAACAACTTGGGCTACATCCGAGTTTAGGCTTGCTTATTGGGT
CGTTTATAACTATTTTGTAATATGAGCATGTAACATGTTAAATTTAAATTTCATTATATATATAT
ATATATTCGTATAATAATAATATTAATATATATTACGTTTGATTTCGAAAAGTCCC
Found at i:100867 original size:44 final size:44
Alignment explanation
Indices: 100817--100902 Score: 129
Period size: 44 Copynumber: 2.0 Consensus size: 44
100807 TAGCTCGTAA
*
100817 TTTGCACCGAAGTGCCATATAATTGTCCCGAA-GAACCACATAGG
1 TTTGCACCGAAGTGCCACATAATTGTCCCGAATG-ACCACATAGG
* *
100861 TTTGCACCGAAGTGTCACATATTTGTCCCGAATGACCACATA
1 TTTGCACCGAAGTGCCACATAATTGTCCCGAATGACCACATA
100903 ATTATCTCGA
Statistics
Matches: 38, Mismatches: 3, Indels: 2
0.88 0.07 0.05
Matches are distributed among these distances:
44 37 0.97
45 1 0.03
ACGTcount: A:0.30, C:0.26, G:0.19, T:0.26
Consensus pattern (44 bp):
TTTGCACCGAAGTGCCACATAATTGTCCCGAATGACCACATAGG
Found at i:100891 original size:21 final size:21
Alignment explanation
Indices: 100823--100902 Score: 65
Period size: 21 Copynumber: 3.7 Consensus size: 21
100813 GTAATTTGCA
* *
100823 CCGAAGTGCCATATAATTGTC
1 CCGAAGTGCCACATATTTGTC
**
100844 CCGAAGAACCACATAGGTTTG-C
1 CCGAAGTGCCACATA--TTTGTC
*
100866 ACCGAAGTGTCACATATTTGTC
1 -CCGAAGTGCCACATATTTGTC
100888 CCGAA-TGACCACATA
1 CCGAAGTG-CCACATA
100903 ATTATCTCGA
Statistics
Matches: 46, Mismatches: 8, Indels: 10
0.72 0.12 0.16
Matches are distributed among these distances:
20 2 0.04
21 27 0.59
22 2 0.04
23 15 0.33
ACGTcount: A:0.31, C:0.26, G:0.19, T:0.24
Consensus pattern (21 bp):
CCGAAGTGCCACATATTTGTC
Found at i:100932 original size:21 final size:21
Alignment explanation
Indices: 100889--100933 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
100879 ATATTTGTCC
* *
100889 CGAATGACCACATAATTATCT
1 CGAATGACCACATAATAACCT
100910 CGAATGACCACATAA-AACCCT
1 CGAATGACCACATAATAA-CCT
100931 CGA
1 CGA
100934 CTCTTGGCAT
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
20 1 0.05
21 20 0.95
ACGTcount: A:0.40, C:0.29, G:0.11, T:0.20
Consensus pattern (21 bp):
CGAATGACCACATAATAACCT
Found at i:101536 original size:53 final size:53
Alignment explanation
Indices: 101478--101653 Score: 219
Period size: 53 Copynumber: 3.3 Consensus size: 53
101468 AATACTTGCC
* * * * * *
101478 TTCAAGGGTATTGATACCTTCTCATGGTACCGATACCGAA-ATAGCATTCGATG
1 TTCAAGGGTATCGATACCTCCTCAAGGTACCGATACC-AATCTGGCATTTGATG
* * * *
101531 TTCAAGGGTATCAATACCTGCTCAAGGTACTGATACCAATCTGGCATTTAATG
1 TTCAAGGGTATCGATACCTCCTCAAGGTACCGATACCAATCTGGCATTTGATG
* *
101584 TTCAAAGGTATCGATATCTCCTCAAGGTACCGATACCAATCTGGCATTTGATG
1 TTCAAGGGTATCGATACCTCCTCAAGGTACCGATACCAATCTGGCATTTGATG
101637 TTTCAAGGGTATCGATA
1 -TTCAAGGGTATCGATA
101654 TCATCCTTCA
Statistics
Matches: 105, Mismatches: 16, Indels: 3
0.85 0.13 0.02
Matches are distributed among these distances:
52 2 0.02
53 88 0.84
54 15 0.14
ACGTcount: A:0.29, C:0.20, G:0.20, T:0.31
Consensus pattern (53 bp):
TTCAAGGGTATCGATACCTCCTCAAGGTACCGATACCAATCTGGCATTTGATG
Found at i:101669 original size:20 final size:20
Alignment explanation
Indices: 101644--101693 Score: 66
Period size: 20 Copynumber: 2.5 Consensus size: 20
101634 ATGTTTCAAG
*
101644 GGTATCGATATCATCCTTCA
1 GGTATCAATATCATCCTTCA
*
101664 GGTATCAATATTATCCTTACA
1 GGTATCAATATCATCCTT-CA
101685 -GTATCAATA
1 GGTATCAATA
101694 CCCCTTCAAC
Statistics
Matches: 27, Mismatches: 2, Indels: 2
0.87 0.06 0.06
Matches are distributed among these distances:
20 25 0.93
21 2 0.07
ACGTcount: A:0.32, C:0.20, G:0.12, T:0.36
Consensus pattern (20 bp):
GGTATCAATATCATCCTTCA
Found at i:102764 original size:21 final size:21
Alignment explanation
Indices: 102712--102790 Score: 95
Period size: 21 Copynumber: 3.7 Consensus size: 21
102702 ATATGAAATT
* *
102712 TTGTCCCAAAGGACCTGTGAA
1 TTGTCCCGAAGGACCTATGAA
* *
102733 TATGTCTCGAAGGACCTAAGAA
1 T-TGTCCCGAAGGACCTATGAA
*
102755 TTGTCCCGAAGGACATATGAA
1 TTGTCCCGAAGGACCTATGAA
*
102776 TTGTCCTGAAGGACC
1 TTGTCCCGAAGGACC
102791 GCGTAAACCC
Statistics
Matches: 48, Mismatches: 9, Indels: 2
0.81 0.15 0.03
Matches are distributed among these distances:
21 31 0.65
22 17 0.35
ACGTcount: A:0.30, C:0.22, G:0.24, T:0.24
Consensus pattern (21 bp):
TTGTCCCGAAGGACCTATGAA
Found at i:103124 original size:7 final size:7
Alignment explanation
Indices: 103112--103137 Score: 52
Period size: 7 Copynumber: 3.7 Consensus size: 7
103102 TTCACTTTCA
103112 CATATCC
1 CATATCC
103119 CATATCC
1 CATATCC
103126 CATATCC
1 CATATCC
103133 CATAT
1 CATAT
103138 TCATTTTCTC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
7 19 1.00
ACGTcount: A:0.31, C:0.38, G:0.00, T:0.31
Consensus pattern (7 bp):
CATATCC
Found at i:108587 original size:20 final size:23
Alignment explanation
Indices: 108562--108604 Score: 65
Period size: 23 Copynumber: 2.0 Consensus size: 23
108552 ATATATATTA
108562 ATAATT-TAAT-T-TTAAAAATT
1 ATAATTCTAATATATTAAAAATT
108582 ATAATTCTAATATATTAAAAATT
1 ATAATTCTAATATATTAAAAATT
108605 TTAAATTATT
Statistics
Matches: 20, Mismatches: 0, Indels: 3
0.87 0.00 0.13
Matches are distributed among these distances:
20 6 0.30
21 4 0.20
22 1 0.05
23 9 0.45
ACGTcount: A:0.51, C:0.02, G:0.00, T:0.47
Consensus pattern (23 bp):
ATAATTCTAATATATTAAAAATT
Found at i:110983 original size:31 final size:31
Alignment explanation
Indices: 110909--110976 Score: 109
Period size: 31 Copynumber: 2.2 Consensus size: 31
110899 TAGTTACGTT
* *
110909 GGGGATCATATTGCAAACAGACTAAATGTTG
1 GGGGACCATATTGAAAACAGACTAAATGTTG
*
110940 GGGGACCATATTGAAAATAGACTAAATGTTG
1 GGGGACCATATTGAAAACAGACTAAATGTTG
110971 GGGGAC
1 GGGGAC
110977 TGTATTGTAA
Statistics
Matches: 34, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
31 34 1.00
ACGTcount: A:0.35, C:0.12, G:0.29, T:0.24
Consensus pattern (31 bp):
GGGGACCATATTGAAAACAGACTAAATGTTG
Found at i:111260 original size:30 final size:30
Alignment explanation
Indices: 111226--111300 Score: 132
Period size: 30 Copynumber: 2.5 Consensus size: 30
111216 GACATAATGA
* *
111226 AAAATTAAATATTGATTTTAAAGTATAATT
1 AAAATTGAATATTGATTTTAAAATATAATT
111256 AAAATTGAATATTGATTTTAAAATATAATT
1 AAAATTGAATATTGATTTTAAAATATAATT
111286 AAAATTGAATATTGA
1 AAAATTGAATATTGA
111301 ATATAATTAA
Statistics
Matches: 43, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
30 43 1.00
ACGTcount: A:0.51, C:0.00, G:0.08, T:0.41
Consensus pattern (30 bp):
AAAATTGAATATTGATTTTAAAATATAATT
Found at i:111292 original size:23 final size:22
Alignment explanation
Indices: 111266--111329 Score: 60
Period size: 23 Copynumber: 2.8 Consensus size: 22
111256 AAAATTGAAT
111266 ATTGATTTTAAAATATAATTAAA
1 ATTGATTTTAAAATATAATT-AA
* *
111289 ATTGAATATT-GAATATAATTAA
1 ATTG-ATTTTAAAATATAATTAA
111311 ATT-ATTTGATAAAATATAA
1 ATTGATTT--TAAAATATAA
111330 ATTTTAAAAG
Statistics
Matches: 33, Mismatches: 4, Indels: 8
0.73 0.09 0.18
Matches are distributed among these distances:
20 3 0.09
22 6 0.18
23 20 0.61
24 4 0.12
ACGTcount: A:0.52, C:0.00, G:0.06, T:0.42
Consensus pattern (22 bp):
ATTGATTTTAAAATATAATTAA
Found at i:111858 original size:29 final size:30
Alignment explanation
Indices: 111826--111888 Score: 101
Period size: 30 Copynumber: 2.1 Consensus size: 30
111816 CAATACAGTC
* *
111826 TCCC-AACATTTAGTCTCTTTTCAATATGG
1 TCCCAAACATTTAGTCTATTTGCAATATGG
111855 TCCCAAACATTTAGTCTATTTGCAATATGG
1 TCCCAAACATTTAGTCTATTTGCAATATGG
111885 TCCC
1 TCCC
111889 CGACGTAACT
Statistics
Matches: 31, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
29 4 0.13
30 27 0.87
ACGTcount: A:0.25, C:0.25, G:0.11, T:0.38
Consensus pattern (30 bp):
TCCCAAACATTTAGTCTATTTGCAATATGG
Found at i:124254 original size:30 final size:30
Alignment explanation
Indices: 124220--124279 Score: 111
Period size: 30 Copynumber: 2.0 Consensus size: 30
124210 CCCGAAGGAC
124220 CTATCCAGAGGTCATAAAGATCATCGGTAA
1 CTATCCAGAGGTCATAAAGATCATCGGTAA
*
124250 CTATCCAGAGGTCATAAAGATCCTCGGTAA
1 CTATCCAGAGGTCATAAAGATCATCGGTAA
124280 ATGTCCATAG
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
30 29 1.00
ACGTcount: A:0.35, C:0.22, G:0.20, T:0.23
Consensus pattern (30 bp):
CTATCCAGAGGTCATAAAGATCATCGGTAA
Found at i:124292 original size:30 final size:30
Alignment explanation
Indices: 124223--124292 Score: 104
Period size: 30 Copynumber: 2.3 Consensus size: 30
124213 GAAGGACCTA
* * *
124223 TCCAGAGGTCATAAAGATCATCGGTAACTA
1 TCCAGAGGTCATAAAGATCCTCGGTAAATG
124253 TCCAGAGGTCATAAAGATCCTCGGTAAATG
1 TCCAGAGGTCATAAAGATCCTCGGTAAATG
*
124283 TCCATAGGTC
1 TCCAGAGGTC
124293 CCGAAGAACC
Statistics
Matches: 36, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
30 36 1.00
ACGTcount: A:0.33, C:0.21, G:0.21, T:0.24
Consensus pattern (30 bp):
TCCAGAGGTCATAAAGATCCTCGGTAAATG
Found at i:124386 original size:63 final size:62
Alignment explanation
Indices: 124281--124402 Score: 183
Period size: 63 Copynumber: 2.0 Consensus size: 62
124271 CCTCGGTAAA
* *
124281 TGTCCATAGGTCCCGAAGAACCTAGGTAAACTGTCCATATGTTCCTTAGAACATAGGTATAC
1 TGTCCATAGGTCCCGAAGAACATAGGTAAACTGTCCATATGTTCCGTAGAACATAGGTATAC
* *
124343 TGTCCATATGTCTCGAA-AGACATAGGTAAAACTGTCCATATGTTCCGTAGAACATAGGTA
1 TGTCCATAGGTCCCGAAGA-ACATAGGT-AAACTGTCCATATGTTCCGTAGAACATAGGTA
124403 AACCCTCGAC
Statistics
Matches: 54, Mismatches: 4, Indels: 3
0.89 0.07 0.05
Matches are distributed among these distances:
61 1 0.02
62 22 0.41
63 31 0.57
ACGTcount: A:0.32, C:0.20, G:0.20, T:0.28
Consensus pattern (62 bp):
TGTCCATAGGTCCCGAAGAACATAGGTAAACTGTCCATATGTTCCGTAGAACATAGGTATAC
Found at i:124398 original size:32 final size:31
Alignment explanation
Indices: 124275--124405 Score: 151
Period size: 31 Copynumber: 4.2 Consensus size: 31
124265 AAAGATCCTC
* * * *
124275 GGTAAA-TGTCCATAGGTCCCGAAGAACCTA
1 GGTAAACTGTCCATATGTTCCGTAGAACATA
*
124305 GGTAAACTGTCCATATGTTCCTTAGAACATA
1 GGTAAACTGTCCATATGTTCCGTAGAACATA
* *
124336 GGTATACTGTCCATATG-TCTCG-AAAGACATA
1 GGTAAACTGTCCATATGTTC-CGTAGA-ACATA
124367 GGTAAAACTGTCCATATGTTCCGTAGAACATA
1 GGT-AAACTGTCCATATGTTCCGTAGAACATA
124399 GGTAAAC
1 GGTAAAC
124406 CCTCGACTCT
Statistics
Matches: 85, Mismatches: 10, Indels: 11
0.80 0.09 0.10
Matches are distributed among these distances:
30 10 0.12
31 48 0.56
32 23 0.27
33 4 0.05
ACGTcount: A:0.34, C:0.20, G:0.20, T:0.27
Consensus pattern (31 bp):
GGTAAACTGTCCATATGTTCCGTAGAACATA
Found at i:125396 original size:21 final size:21
Alignment explanation
Indices: 125372--125416 Score: 63
Period size: 21 Copynumber: 2.1 Consensus size: 21
125362 TGTTGTTCGT
* *
125372 TTGAAGGGGTATCGGTTCCCC
1 TTGAAGGGGTACCGATTCCCC
*
125393 TTGAATGGGTACCGATTCCCC
1 TTGAAGGGGTACCGATTCCCC
125414 TTG
1 TTG
125417 CCTAGAAATC
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
21 21 1.00
ACGTcount: A:0.16, C:0.24, G:0.29, T:0.31
Consensus pattern (21 bp):
TTGAAGGGGTACCGATTCCCC
Found at i:128503 original size:30 final size:30
Alignment explanation
Indices: 128469--128541 Score: 128
Period size: 30 Copynumber: 2.4 Consensus size: 30
128459 CCCGAAGGAC
128469 CTATCCAGAGGTCATAAAGATCCTCGGTAA
1 CTATCCAGAGGTCATAAAGATCCTCGGTAA
128499 CTATCCAGAGGTCATAAAGATCCTCGGTAA
1 CTATCCAGAGGTCATAAAGATCCTCGGTAA
* *
128529 CTGTCCATAGGTC
1 CTATCCAGAGGTC
128542 CCGAAGAACC
Statistics
Matches: 41, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
30 41 1.00
ACGTcount: A:0.30, C:0.25, G:0.21, T:0.25
Consensus pattern (30 bp):
CTATCCAGAGGTCATAAAGATCCTCGGTAA
Found at i:128646 original size:63 final size:61
Alignment explanation
Indices: 128524--128652 Score: 170
Period size: 63 Copynumber: 2.1 Consensus size: 61
128514 AAAGATCCTC
* * *
128524 GGTAACTGTCCATAGGTCCCGAAGAACCTAGGTAAATTGTCCATATGTTCCTTAGAACATA
1 GGTAACTGTCCATAGGTCCCGAAGAACATAGGTAAACTGTCCATATGTTCCGTAGAACATA
* * *
128585 GGTATACTGTCCATATGTCTCGAA-AGACATAGGTAAAACTGTTCATATGTTCCGTAGAACATA
1 GGTA-ACTGTCCATAGGTCCCGAAGA-ACATAGGT-AAACTGTCCATATGTTCCGTAGAACATA
128648 GGTAA
1 GGTAA
128653 ACCCTCGACT
Statistics
Matches: 59, Mismatches: 6, Indels: 5
0.84 0.09 0.07
Matches are distributed among these distances:
61 5 0.08
62 25 0.42
63 29 0.49
ACGTcount: A:0.33, C:0.19, G:0.20, T:0.29
Consensus pattern (61 bp):
GGTAACTGTCCATAGGTCCCGAAGAACATAGGTAAACTGTCCATATGTTCCGTAGAACATA
Found at i:128647 original size:32 final size:31
Alignment explanation
Indices: 128527--128654 Score: 134
Period size: 31 Copynumber: 4.1 Consensus size: 31
128517 GATCCTCGGT
* * * *
128527 AACTGTCCATAGGTCCCGAAGAACCTAGGTA
1 AACTGTCCATATGTTCCGTAGAACATAGGTA
* *
128558 AATTGTCCATATGTTCCTTAGAACATAGGTA
1 AACTGTCCATATGTTCCGTAGAACATAGGTA
* *
128589 TACTGTCCATATG-TCTCG-AAAGACATAGGTAA
1 AACTGTCCATATGTTC-CGTAGA-ACATAGGT-A
*
128621 AACTGTTCATATGTTCCGTAGAACATAGGTA
1 AACTGTCCATATGTTCCGTAGAACATAGGTA
128652 AAC
1 AAC
128655 CCTCGACTCT
Statistics
Matches: 79, Mismatches: 13, Indels: 10
0.77 0.13 0.10
Matches are distributed among these distances:
30 4 0.05
31 49 0.62
32 22 0.28
33 4 0.05
ACGTcount: A:0.34, C:0.20, G:0.19, T:0.28
Consensus pattern (31 bp):
AACTGTCCATATGTTCCGTAGAACATAGGTA
Found at i:129392 original size:22 final size:22
Alignment explanation
Indices: 129348--129389 Score: 59
Period size: 22 Copynumber: 2.0 Consensus size: 22
129338 TAAATCAATT
*
129348 TCATATAACTCCTATAATCTTC
1 TCATATAACTCCTATAACCTTC
*
129370 TCATATAACTTC-ATAACCTT
1 TCATATAACTCCTATAACCTT
129390 TCTTATGTAA
Statistics
Matches: 18, Mismatches: 2, Indels: 1
0.86 0.10 0.05
Matches are distributed among these distances:
21 7 0.39
22 11 0.61
ACGTcount: A:0.33, C:0.26, G:0.00, T:0.40
Consensus pattern (22 bp):
TCATATAACTCCTATAACCTTC
Found at i:129863 original size:21 final size:21
Alignment explanation
Indices: 129839--129883 Score: 72
Period size: 21 Copynumber: 2.1 Consensus size: 21
129829 TGTTGTTCGT
*
129839 TTGAAGGGGTATCGGTTCCCC
1 TTGAAGGGGTATCGATTCCCC
*
129860 TTGAATGGGTATCGATTCCCC
1 TTGAAGGGGTATCGATTCCCC
129881 TTG
1 TTG
129884 CCCAGAAATC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
21 22 1.00
ACGTcount: A:0.16, C:0.22, G:0.29, T:0.33
Consensus pattern (21 bp):
TTGAAGGGGTATCGATTCCCC
Found at i:146497 original size:3 final size:3
Alignment explanation
Indices: 146489--146513 Score: 50
Period size: 3 Copynumber: 8.3 Consensus size: 3
146479 TAAATAAAAT
146489 TTA TTA TTA TTA TTA TTA TTA TTA T
1 TTA TTA TTA TTA TTA TTA TTA TTA T
146514 GTTAATATAT
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 22 1.00
ACGTcount: A:0.32, C:0.00, G:0.00, T:0.68
Consensus pattern (3 bp):
TTA
Found at i:150450 original size:14 final size:15
Alignment explanation
Indices: 150428--150461 Score: 52
Period size: 14 Copynumber: 2.3 Consensus size: 15
150418 GTTTAATCAA
*
150428 ATATATTATTTTTT-
1 ATATTTTATTTTTTC
150442 ATATTTTATTTTTTC
1 ATATTTTATTTTTTC
150457 ATATT
1 ATATT
150462 CAACTAAAAA
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
14 13 0.72
15 5 0.28
ACGTcount: A:0.26, C:0.03, G:0.00, T:0.71
Consensus pattern (15 bp):
ATATTTTATTTTTTC
Found at i:155532 original size:53 final size:55
Alignment explanation
Indices: 155420--155535 Score: 173
Period size: 53 Copynumber: 2.1 Consensus size: 55
155410 ATGCTTTAAT
*
155420 TTGAGTATTGTGTCAATTATCCAACTTATTTAGTATCACTAAACTTGTGGCACCTAA
1 TTGAGTATTGTGTCAATTATCCAAC-T-TGTAGTATCACTAAACTTGTGGCACCTAA
* *
155477 TTGAGTATTGTGTCAATTATCCAAC-TGT-GTATCACTCAGCTTGTGGCACCTAA
1 TTGAGTATTGTGTCAATTATCCAACTTGTAGTATCACTAAACTTGTGGCACCTAA
155530 TTGAGT
1 TTGAGT
155536 GAAAGGTTTA
Statistics
Matches: 56, Mismatches: 3, Indels: 4
0.89 0.05 0.06
Matches are distributed among these distances:
53 29 0.52
54 2 0.04
57 25 0.45
ACGTcount: A:0.27, C:0.18, G:0.17, T:0.38
Consensus pattern (55 bp):
TTGAGTATTGTGTCAATTATCCAACTTGTAGTATCACTAAACTTGTGGCACCTAA
Found at i:156845 original size:16 final size:17
Alignment explanation
Indices: 156813--156853 Score: 75
Period size: 16 Copynumber: 2.5 Consensus size: 17
156803 TCAACTCGAA
156813 TAACTCGAAATTTTTTT
1 TAACTCGAAATTTTTTT
156830 TAACTCGAAA-TTTTTT
1 TAACTCGAAATTTTTTT
156846 TAACTCGA
1 TAACTCGA
156854 CTCGATCGTA
Statistics
Matches: 24, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
16 14 0.58
17 10 0.42
ACGTcount: A:0.32, C:0.15, G:0.07, T:0.46
Consensus pattern (17 bp):
TAACTCGAAATTTTTTT
Found at i:169622 original size:35 final size:35
Alignment explanation
Indices: 169576--169645 Score: 113
Period size: 35 Copynumber: 2.0 Consensus size: 35
169566 TTAAGAATGC
169576 ATCATTAACAAAGAACTGATGATGCATGGATTACT
1 ATCATTAACAAAGAACTGATGATGCATGGATTACT
* * *
169611 ATCATTTACAAAGAACTGCTGATGCTTGGATTACT
1 ATCATTAACAAAGAACTGATGATGCATGGATTACT
169646 CATTTATTGC
Statistics
Matches: 32, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
35 32 1.00
ACGTcount: A:0.36, C:0.16, G:0.17, T:0.31
Consensus pattern (35 bp):
ATCATTAACAAAGAACTGATGATGCATGGATTACT
Found at i:175851 original size:2 final size:2
Alignment explanation
Indices: 175844--175891 Score: 96
Period size: 2 Copynumber: 24.0 Consensus size: 2
175834 AATTATCCAA
175844 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
175886 AT AT AT
1 AT AT AT
175892 GCTATTTTAA
Statistics
Matches: 46, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 46 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:181467 original size:39 final size:39
Alignment explanation
Indices: 181424--181500 Score: 145
Period size: 39 Copynumber: 2.0 Consensus size: 39
181414 ATATTAATTA
*
181424 ACATGATTATATTAATTAATTTTTTATAAAATAAATTTT
1 ACATGATTATATTAATTAAATTTTTATAAAATAAATTTT
181463 ACATGATTATATTAATTAAATTTTTATAAAATAAATTT
1 ACATGATTATATTAATTAAATTTTTATAAAATAAATTT
181501 AAAATATCAA
Statistics
Matches: 37, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
39 37 1.00
ACGTcount: A:0.45, C:0.03, G:0.03, T:0.49
Consensus pattern (39 bp):
ACATGATTATATTAATTAAATTTTTATAAAATAAATTTT
Found at i:187250 original size:15 final size:16
Alignment explanation
Indices: 187230--187265 Score: 56
Period size: 16 Copynumber: 2.3 Consensus size: 16
187220 GGTATTACCC
187230 GACCTA-TTTCAACCT
1 GACCTATTTTCAACCT
*
187245 GACCTATTTTTAACCT
1 GACCTATTTTCAACCT
187261 GACCT
1 GACCT
187266 CTAAATGATC
Statistics
Matches: 19, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
15 6 0.32
16 13 0.68
ACGTcount: A:0.25, C:0.31, G:0.08, T:0.36
Consensus pattern (16 bp):
GACCTATTTTCAACCT
Found at i:187364 original size:19 final size:19
Alignment explanation
Indices: 187328--187363 Score: 65
Period size: 19 Copynumber: 1.9 Consensus size: 19
187318 ATTATCATGG
187328 ATAAAATTATAAGATTTTA
1 ATAAAATTATAAGATTTTA
187347 ATAAAATTATAAG-TTTT
1 ATAAAATTATAAGATTTT
187364 TTAGCTTATG
Statistics
Matches: 17, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
18 4 0.24
19 13 0.76
ACGTcount: A:0.50, C:0.00, G:0.06, T:0.44
Consensus pattern (19 bp):
ATAAAATTATAAGATTTTA
Found at i:187546 original size:14 final size:13
Alignment explanation
Indices: 187524--187569 Score: 53
Period size: 13 Copynumber: 3.7 Consensus size: 13
187514 TGCAAAGGAA
187524 AATTAATATAGTTT
1 AATT-ATATAGTTT
*
187538 AATT-TATA--TA
1 AATTATATAGTTT
187548 AATTATATAGTTT
1 AATTATATAGTTT
187561 AATTATATA
1 AATTATATA
187570 AAAATAATAA
Statistics
Matches: 27, Mismatches: 2, Indels: 7
0.75 0.06 0.19
Matches are distributed among these distances:
10 5 0.19
11 4 0.15
12 4 0.15
13 10 0.37
14 4 0.15
ACGTcount: A:0.46, C:0.00, G:0.04, T:0.50
Consensus pattern (13 bp):
AATTATATAGTTT
Found at i:187557 original size:23 final size:23
Alignment explanation
Indices: 187523--187571 Score: 82
Period size: 23 Copynumber: 2.1 Consensus size: 23
187513 ATGCAAAGGA
187523 AAATTAATATAGTTTAATTTATAT
1 AAATTAATATAGTTTAA-TTATAT
187547 AAATT-ATATAGTTTAATTATAT
1 AAATTAATATAGTTTAATTATAT
187569 AAA
1 AAA
187572 AATAATAATA
Statistics
Matches: 25, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
22 9 0.36
23 11 0.44
24 5 0.20
ACGTcount: A:0.49, C:0.00, G:0.04, T:0.47
Consensus pattern (23 bp):
AAATTAATATAGTTTAATTATAT
Found at i:187574 original size:24 final size:24
Alignment explanation
Indices: 187522--187578 Score: 82
Period size: 24 Copynumber: 2.4 Consensus size: 24
187512 AATGCAAAGG
187522 AAAATTAATATAGTTTAATTTATA
1 AAAATTAATATAGTTTAATTTATA
*
187546 TAAATT-ATATAGTTTAATTATATA
1 AAAATTAATATAGTTTAATT-TATA
187570 AAAA-TAATA
1 AAAATTAATA
187579 ATATTATATA
Statistics
Matches: 29, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
23 14 0.48
24 15 0.52
ACGTcount: A:0.53, C:0.00, G:0.04, T:0.44
Consensus pattern (24 bp):
AAAATTAATATAGTTTAATTTATA
Found at i:190009 original size:101 final size:101
Alignment explanation
Indices: 189829--190030 Score: 280
Period size: 101 Copynumber: 2.0 Consensus size: 101
189819 TGGAGCGATG
* * * * * *
189829 GGTTATTTGGAGAGAGGAAAATAATTAATAGCAGAAGAAAAATAAAAATATGAGGGAAATAATAA
1 GGTTATTTGGAGAAAGGAAAACAATTAAGAGCAGAAGAAAAATAAAAATAGGAGGAAAATAACAA
* * * *
189894 TTTTGATTTGGTTATTTGGCGTCACCGTCTTATATA
66 TTCTGATTGGGTTATTTGGCGCCACCGCCTTATATA
* *
189930 GGTTGTTTGGAGATAAGG-AAACAATTAAGAGCAGAAGAAAAATAAAAATAGGAGGAAAATGACA
1 GGTTATTTGGAGA-AAGGAAAACAATTAAGAGCAGAAGAAAAATAAAAATAGGAGGAAAATAACA
189994 ATTCTGATTGGGTTATTTGGCGCCACCGCCTTATATA
65 ATTCTGATTGGGTTATTTGGCGCCACCGCCTTATATA
190031 ATTTATATTA
Statistics
Matches: 88, Mismatches: 12, Indels: 2
0.86 0.12 0.02
Matches are distributed among these distances:
101 85 0.97
102 3 0.03
ACGTcount: A:0.40, C:0.08, G:0.23, T:0.28
Consensus pattern (101 bp):
GGTTATTTGGAGAAAGGAAAACAATTAAGAGCAGAAGAAAAATAAAAATAGGAGGAAAATAACAA
TTCTGATTGGGTTATTTGGCGCCACCGCCTTATATA
Found at i:190080 original size:16 final size:15
Alignment explanation
Indices: 190052--190159 Score: 86
Period size: 16 Copynumber: 7.3 Consensus size: 15
190042 TAAAGTATTT
190052 ATAATTAATATTAAA
1 ATAATTAATATTAAA
190067 ATAATTATATATT---
1 ATAATTA-ATATTAAA
*
190080 ATAATTAATATAAAA
1 ATAATTAATATTAAA
190095 ATAATTATATATT---
1 ATAATTA-ATATTAAA
190108 ATAATTAATATTAATA
1 ATAATTAATATTAA-A
*
190124 TTAATTAATATTAATA
1 ATAATTAATATTAA-A
* *
190140 TTAACTT-ATATTAAT
1 ATAA-TTAATATTAAA
190155 ATAAT
1 ATAAT
190160 ATAGTTTATA
Statistics
Matches: 78, Mismatches: 5, Indels: 21
0.75 0.05 0.20
Matches are distributed among these distances:
12 9 0.12
13 14 0.18
14 1 0.01
15 17 0.22
16 35 0.45
17 2 0.03
ACGTcount: A:0.53, C:0.01, G:0.00, T:0.46
Consensus pattern (15 bp):
ATAATTAATATTAAA
Found at i:190081 original size:28 final size:28
Alignment explanation
Indices: 190050--190136 Score: 140
Period size: 28 Copynumber: 3.1 Consensus size: 28
190040 AATAAAGTAT
190050 TTATAATTAATATTAAAATAATTATATA
1 TTATAATTAATATTAAAATAATTATATA
*
190078 TTATAATTAATATAAAAATAATTATATA
1 TTATAATTAATATTAAAATAATTATATA
*
190106 TTATAATTAATATTAATATTAATTA-ATA
1 TTATAATTAATATTAA-AATAATTATATA
190134 TTA
1 TTA
190137 ATATTAACTT
Statistics
Matches: 55, Mismatches: 3, Indels: 2
0.92 0.05 0.03
Matches are distributed among these distances:
28 48 0.87
29 7 0.13
ACGTcount: A:0.53, C:0.00, G:0.00, T:0.47
Consensus pattern (28 bp):
TTATAATTAATATTAAAATAATTATATA
Found at i:190120 original size:6 final size:6
Alignment explanation
Indices: 190098--190161 Score: 59
Period size: 6 Copynumber: 11.3 Consensus size: 6
190088 TATAAAAATA
190098 ATTATAT ATT-AT AATTAAT ATTAAT ATT-A- ATTAAT ATTAAT ATTAA-
1 ATTA-AT ATTAAT -ATTAAT ATTAAT ATTAAT ATTAAT ATTAAT ATTAAT
*
190144 CTT-AT ATTAAT A-TAAT AT
1 ATTAAT ATTAAT ATTAAT AT
190162 AGTTTATAAT
Statistics
Matches: 48, Mismatches: 2, Indels: 15
0.74 0.03 0.23
Matches are distributed among these distances:
4 4 0.08
5 13 0.27
6 26 0.54
7 5 0.10
ACGTcount: A:0.48, C:0.02, G:0.00, T:0.50
Consensus pattern (6 bp):
ATTAAT
Found at i:190136 original size:22 final size:22
Alignment explanation
Indices: 190102--190161 Score: 72
Period size: 22 Copynumber: 2.8 Consensus size: 22
190092 AAAATAATTA
190102 TATATT-ATAATTAATATTAATAT
1 TATATTAAT-ATTAATATTAA-AT
*
190125 TA-ATTAATATTAATATTAACT
1 TATATTAATATTAATATTAAAT
190146 TATATTAATA-TAATAT
1 TATATTAATATTAATAT
190162 AGTTTATAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 6
0.83 0.02 0.15
Matches are distributed among these distances:
21 9 0.26
22 21 0.62
23 4 0.12
ACGTcount: A:0.48, C:0.02, G:0.00, T:0.50
Consensus pattern (22 bp):
TATATTAATATTAATATTAAAT
Found at i:190137 original size:50 final size:52
Alignment explanation
Indices: 190050--190221 Score: 130
Period size: 50 Copynumber: 3.4 Consensus size: 52
190040 AATAAAGTAT
*
190050 TTATAATTAATATTAAAATAATTATATATTATAATTAATATAAAAATA-ATT-ATATA
1 TTATAATTAATATT--AAT-ATTA-AT-TAAT-ATTAATATAAAAATATATTAATATA
* **
190106 TTATAATTAATATTAATATTAATTAATATTAATATTAACTTATATTAATATA
1 TTATAATTAATATTAATATTAATTAATATTAATATAAAAATATATTAATATA
* * * * *
190158 ATATAGTT--TA-TAATTTGTAATTAATATTAATAT-AAAATATAGT-CTATA
1 TTATAATTAATATTAATAT-TAATTAATATTAATATAAAAATATATTAATATA
190206 --A-AATTAATATTAATAT
1 TTATAATTAATATTAATAT
190222 AAACTATATG
Statistics
Matches: 97, Mismatches: 13, Indels: 20
0.75 0.10 0.15
Matches are distributed among these distances:
45 3 0.03
46 1 0.01
47 2 0.02
48 9 0.09
49 12 0.12
50 30 0.31
51 6 0.06
52 13 0.13
53 4 0.04
54 3 0.03
56 14 0.14
ACGTcount: A:0.51, C:0.01, G:0.02, T:0.47
Consensus pattern (52 bp):
TTATAATTAATATTAATATTAATTAATATTAATATAAAAATATATTAATATA
Found at i:190142 original size:28 final size:28
Alignment explanation
Indices: 190035--190161 Score: 120
Period size: 28 Copynumber: 4.5 Consensus size: 28
190025 TATATAATTT
*
190035 ATATTAATAAAGTATTTATAATTAATATTA
1 ATATTAATTAA-TA-TTATAATTAATATTA
*
190065 A-AATAATTATATATTATAATTAATA-TA
1 ATATTAATTA-ATATTATAATTAATATTA
* *
190092 AAAATAATTATATATTATAATTAATATTA
1 ATATTAATTA-ATATTATAATTAATATTA
*
190121 ATATTAATTAATATTA-ATATTAA-CTT-
1 ATATTAATTAATATTATA-ATTAATATTA
190147 ATATTAATATAATAT
1 ATATTAAT-TAATAT
190162 AGTTTATAAT
Statistics
Matches: 87, Mismatches: 5, Indels: 13
0.83 0.05 0.12
Matches are distributed among these distances:
26 8 0.09
27 12 0.14
28 47 0.54
29 18 0.21
30 2 0.02
ACGTcount: A:0.52, C:0.01, G:0.01, T:0.46
Consensus pattern (28 bp):
ATATTAATTAATATTATAATTAATATTA
Found at i:190214 original size:31 final size:30
Alignment explanation
Indices: 190176--190360 Score: 126
Period size: 31 Copynumber: 5.8 Consensus size: 30
190166 TATAATTTGT
*
190176 AATTAATATTAATATAAAATATAGTCTATAA
1 AATTAATATTAATATAAACTATAGT-TATAA
190207 AATTAATATTAATATAAACTATATGTTAT-A
1 AATTAATATTAATATAAACTATA-GTTATAA
* *
190237 AATTCTATAGTATAATTTATAAACTATAGTTAATAT
1 AATT-AATA-T-TAA--TATAAACTATAGTT-ATAA
**
190273 AATTAATATTAATAT--TGTATAGTTTATAA
1 AATTAATATTAATATAAACTATAG-TTATAA
* *
190302 ACTATAGACTATATTAATATAAATTATAGTTA-AGA
1 A--AT-TA--ATATTAATATAAACTATAGTTATA-A
*
190337 TAATTAACATTAATATAAACTATA
1 -AATTAATATTAATATAAACTATA
190361 TAGTACATTA
Statistics
Matches: 123, Mismatches: 13, Indels: 36
0.72 0.08 0.21
Matches are distributed among these distances:
29 9 0.07
30 7 0.06
31 49 0.40
32 4 0.03
33 7 0.06
34 17 0.14
35 20 0.16
36 10 0.08
ACGTcount: A:0.49, C:0.04, G:0.05, T:0.42
Consensus pattern (30 bp):
AATTAATATTAATATAAACTATAGTTATAA
Found at i:190228 original size:24 final size:25
Alignment explanation
Indices: 190183--190229 Score: 60
Period size: 24 Copynumber: 1.9 Consensus size: 25
190173 TGTAATTAAT
**
190183 ATTAATATAAAATATAGTCTATAAA
1 ATTAATATAAAATATAAACTATAAA
*
190208 ATTAATAT-TAATATAAACTATA
1 ATTAATATAAAATATAAACTATA
190230 TGTTATAAAT
Statistics
Matches: 19, Mismatches: 3, Indels: 1
0.83 0.13 0.04
Matches are distributed among these distances:
24 11 0.58
25 8 0.42
ACGTcount: A:0.55, C:0.04, G:0.02, T:0.38
Consensus pattern (25 bp):
ATTAATATAAAATATAAACTATAAA
Found at i:190329 original size:15 final size:15
Alignment explanation
Indices: 190311--190361 Score: 50
Period size: 15 Copynumber: 3.3 Consensus size: 15
190301 AACTATAGAC
190311 TATATTAATATAAAT
1 TATATTAATATAAAT
*
190326 TATAGTTAAGAT-AAT
1 TATA-TTAATATAAAT
* *
190341 TAACATTAATATAAAC
1 T-ATATTAATATAAAT
190357 TATAT
1 TATAT
190362 AGTACATTAA
Statistics
Matches: 28, Mismatches: 5, Indels: 6
0.72 0.13 0.15
Matches are distributed among these distances:
15 17 0.61
16 11 0.39
ACGTcount: A:0.51, C:0.04, G:0.04, T:0.41
Consensus pattern (15 bp):
TATATTAATATAAAT
Found at i:190368 original size:22 final size:22
Alignment explanation
Indices: 190343--190445 Score: 88
Period size: 22 Copynumber: 4.8 Consensus size: 22
190333 AAGATAATTA
190343 ACATTAATATAAACTATATAGT
1 ACATTAATATAAACTATATAGT
190365 ACATTAATATAAAC--TATAGT
1 ACATTAATATAAACTATATAGT
** * * *
190385 TTATAAATTATATACTATA-GGT
1 ACATTAA-TATAAACTATATAGT
* *
190407 -TATAAAGTATAAACTATATAGT
1 ACATTAA-TATAAACTATATAGT
*
190429 ACACTAATATAAACTAT
1 ACATTAATATAAACTAT
190446 TGTTTATAAA
Statistics
Matches: 65, Mismatches: 11, Indels: 10
0.76 0.13 0.12
Matches are distributed among these distances:
20 10 0.15
21 22 0.34
22 28 0.43
23 5 0.08
ACGTcount: A:0.49, C:0.09, G:0.06, T:0.37
Consensus pattern (22 bp):
ACATTAATATAAACTATATAGT
Found at i:190401 original size:21 final size:21
Alignment explanation
Indices: 190372--190424 Score: 79
Period size: 21 Copynumber: 2.5 Consensus size: 21
190362 AGTACATTAA
* *
190372 TATAAACTATAGTTTATAAAT
1 TATAAACTATAGGTTATAAAG
*
190393 TATATACTATAGGTTATAAAG
1 TATAAACTATAGGTTATAAAG
190414 TATAAACTATA
1 TATAAACTATA
190425 TAGTACACTA
Statistics
Matches: 28, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
21 28 1.00
ACGTcount: A:0.47, C:0.06, G:0.08, T:0.40
Consensus pattern (21 bp):
TATAAACTATAGGTTATAAAG
Found at i:190460 original size:21 final size:20
Alignment explanation
Indices: 190370--190461 Score: 78
Period size: 21 Copynumber: 4.3 Consensus size: 20
190360 ATAGTACATT
190370 AATATAAACTATAGTTTATA
1 AATATAAACTATAGTTTATA
* *
190390 AATTATATACTATAGGTTATA
1 AA-TATAAACTATAGTTTATA
* *
190411 AAGTATAAACTATA-TAGTACA
1 AA-TATAAACTATAGT-TTATA
*
190432 CTAATATAAACTATTGTTTATA
1 --AATATAAACTATAGTTTATA
190454 AACTATAA
1 AA-TATAA
190462 GTTACATATA
Statistics
Matches: 56, Mismatches: 10, Indels: 11
0.73 0.13 0.14
Matches are distributed among these distances:
20 4 0.07
21 36 0.64
22 13 0.23
23 3 0.05
ACGTcount: A:0.48, C:0.08, G:0.07, T:0.38
Consensus pattern (20 bp):
AATATAAACTATAGTTTATA
Found at i:190518 original size:20 final size:22
Alignment explanation
Indices: 190499--190549 Score: 77
Period size: 21 Copynumber: 2.4 Consensus size: 22
190489 AAATAGATTG
190499 TATATATACATATACTATTGGT
1 TATATATACATATACTATTGGT
* *
190521 TATATATATATATA-TATAGGT
1 TATATATACATATACTATTGGT
190542 TATATATA
1 TATATATA
190550 GTATACATAG
Statistics
Matches: 27, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
21 14 0.52
22 13 0.48
ACGTcount: A:0.41, C:0.04, G:0.08, T:0.47
Consensus pattern (22 bp):
TATATATACATATACTATTGGT
Found at i:190559 original size:20 final size:21
Alignment explanation
Indices: 190464--190591 Score: 77
Period size: 22 Copynumber: 6.1 Consensus size: 21
190454 AACTATAAGT
*
190464 TACATAT--ATAGTTTATATA
1 TACATATACATAGGTTATATA
* *
190483 -ACATATAAATAGATTGTATATA
1 TACATATACATAG-GT-TATATA
*
190505 TACATATACTATTGGTTATATA
1 TACATATAC-ATAGGTTATATA
* *
190527 TATATATATATAGGTTATATA
1 TACATATACATAGGTTATATA
* *
190548 TA-GTATACATAGTTTATACT-
1 TACATATACATAGGTTATA-TA
* * *
190568 TACATGTACTATAAGTTACATA
1 TACATATAC-ATAGGTTATATA
190590 TA
1 TA
190592 TAGTTTACAT
Statistics
Matches: 85, Mismatches: 14, Indels: 17
0.73 0.12 0.15
Matches are distributed among these distances:
18 6 0.07
20 19 0.22
21 21 0.25
22 28 0.33
23 8 0.09
24 3 0.04
ACGTcount: A:0.41, C:0.07, G:0.09, T:0.43
Consensus pattern (21 bp):
TACATATACATAGGTTATATA
Found at i:190596 original size:35 final size:37
Alignment explanation
Indices: 190556--190629 Score: 98
Period size: 37 Copynumber: 2.1 Consensus size: 37
190546 TATAGTATAC
* *
190556 ATAGTTTATA-CT-TACATGTACTATAAGTTACATAT
1 ATAGTTTACATCTATACATATACTATAAGTTACATAT
* *
190591 ATAGTTTACATGTATACATATACTATATGTTACATAT
1 ATAGTTTACATCTATACATATACTATAAGTTACATAT
190628 AT
1 AT
190630 TAACTATTGT
Statistics
Matches: 33, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
35 9 0.27
36 1 0.03
37 23 0.70
ACGTcount: A:0.38, C:0.11, G:0.08, T:0.43
Consensus pattern (37 bp):
ATAGTTTACATCTATACATATACTATAAGTTACATAT
Found at i:190691 original size:14 final size:14
Alignment explanation
Indices: 190651--190732 Score: 56
Period size: 14 Copynumber: 5.8 Consensus size: 14
190641 TATGCATAAT
* *
190651 GTTTAGGGTCTAGG
1 GTTTAGGGTTTATG
* **
190665 GTTTATGAATTATG
1 GTTTAGGGTTTATG
*
190679 GTTTAGGGTTTATA
1 GTTTAGGGTTTATG
* **
190693 TTTTAATGTTTATG
1 GTTTAGGGTTTATG
* *
190707 ATTTAGGGTTTAGG
1 GTTTAGGGTTTATG
190721 GTTTTAGGGTTT
1 G-TTTAGGGTTT
190733 CTATAAACTA
Statistics
Matches: 49, Mismatches: 18, Indels: 1
0.72 0.26 0.01
Matches are distributed among these distances:
14 39 0.80
15 10 0.20
ACGTcount: A:0.20, C:0.01, G:0.29, T:0.50
Consensus pattern (14 bp):
GTTTAGGGTTTATG
Found at i:191119 original size:2 final size:2
Alignment explanation
Indices: 191112--191202 Score: 73
Period size: 2 Copynumber: 46.5 Consensus size: 2
191102 GTTAACATAC
* * *
191112 AT AT AT AT A- AT AT AT TT AT AT A- AT TT AT AA ACT AT AT AT -T
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A-T AT AT AT AT
* * * *
191152 TT AT AT AT -T TT AT AC AT AT AT AGT TT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT A-T AT AT AT AT AT AT AT AT AT
191194 AT AT AT AT A
1 AT AT AT AT A
191203 ATTAAAAGTA
Statistics
Matches: 71, Mismatches: 12, Indels: 12
0.75 0.13 0.13
Matches are distributed among these distances:
1 4 0.06
2 65 0.92
3 2 0.03
ACGTcount: A:0.45, C:0.02, G:0.01, T:0.52
Consensus pattern (2 bp):
AT
Found at i:191157 original size:40 final size:40
Alignment explanation
Indices: 191112--191200 Score: 99
Period size: 40 Copynumber: 2.2 Consensus size: 40
191102 GTTAACATAC
**
191112 ATATATATAATATATTTATATAATTTATAAACTATATAT-T
1 ATATATATAATATACATATATAATTTATAAA-TATATATAT
* ** * *
191152 TTATATATTTTATACATATATAGTTTATATATATATATAT
1 ATATATATAATATACATATATAATTTATAAATATATATAT
191192 ATATATATA
1 ATATATATA
191201 TAATTAAAAG
Statistics
Matches: 39, Mismatches: 9, Indels: 2
0.78 0.18 0.04
Matches are distributed among these distances:
39 7 0.18
40 32 0.82
ACGTcount: A:0.45, C:0.02, G:0.01, T:0.52
Consensus pattern (40 bp):
ATATATATAATATACATATATAATTTATAAATATATATAT
Found at i:191182 original size:17 final size:15
Alignment explanation
Indices: 191153--191202 Score: 57
Period size: 15 Copynumber: 3.4 Consensus size: 15
191143 CTATATATTT
191153 TATATATTTTATACA
1 TATATATTTTATACA
* *
191168 TATATAGTTTATATA
1 TATATATTTTATACA
* *
191183 TATATA-TATATATA
1 TATATATTTTATACA
191197 TATATA
1 TATATA
191203 ATTAAAAGTA
Statistics
Matches: 32, Mismatches: 3, Indels: 1
0.89 0.08 0.03
Matches are distributed among these distances:
14 13 0.41
15 19 0.59
ACGTcount: A:0.44, C:0.02, G:0.02, T:0.52
Consensus pattern (15 bp):
TATATATTTTATACA
Found at i:191564 original size:2 final size:2
Alignment explanation
Indices: 191557--191588 Score: 64
Period size: 2 Copynumber: 16.0 Consensus size: 2
191547 ACTTTGAATA
191557 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
191589 TTAATATAAA
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 30 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:191717 original size:18 final size:18
Alignment explanation
Indices: 191678--191732 Score: 69
Period size: 18 Copynumber: 3.1 Consensus size: 18
191668 CATAATTTAT
* *
191678 ATATAGCTTATAATA-ATT
1 ATATAGTTTATAATATA-A
191696 ATATAGTTTATAATATAA
1 ATATAGTTTATAATATAA
191714 ATATAGTTTAT-ATATAA
1 ATATAGTTTATAATATAA
191731 AT
1 AT
191733 TTATATTATA
Statistics
Matches: 34, Mismatches: 2, Indels: 3
0.87 0.05 0.08
Matches are distributed among these distances:
17 8 0.24
18 25 0.74
19 1 0.03
ACGTcount: A:0.47, C:0.02, G:0.05, T:0.45
Consensus pattern (18 bp):
ATATAGTTTATAATATAA
Found at i:191730 original size:17 final size:17
Alignment explanation
Indices: 191678--191752 Score: 73
Period size: 17 Copynumber: 4.3 Consensus size: 17
191668 CATAATTTAT
*
191678 ATATAGCTTATA-ATAA
1 ATATAGTTTATATATAA
191694 TTATATAGTTTATAATATAA
1 --ATATAGTTTAT-ATATAA
191714 ATATAGTTTATATATAA
1 ATATAGTTTATATATAA
* *
191731 ATTTA-TATTATATATAT
1 ATATAGT-TTATATATAA
191748 ATATA
1 ATATA
191753 TTATTTTTTT
Statistics
Matches: 50, Mismatches: 4, Indels: 7
0.82 0.07 0.11
Matches are distributed among these distances:
16 1 0.02
17 23 0.46
18 21 0.42
19 1 0.02
20 4 0.08
ACGTcount: A:0.47, C:0.01, G:0.04, T:0.48
Consensus pattern (17 bp):
ATATAGTTTATATATAA
Found at i:191742 original size:15 final size:15
Alignment explanation
Indices: 191708--191756 Score: 53
Period size: 15 Copynumber: 3.1 Consensus size: 15
191698 ATAGTTTATA
*
191708 ATATAAATATAGTTTAT
1 ATATAAATATA-TAT-T
*
191725 ATATAAATTTATATT
1 ATATAAATATATATT
*
191740 ATATATATATATATT
1 ATATAAATATATATT
191755 AT
1 AT
191757 TTTTTTAATT
Statistics
Matches: 28, Mismatches: 4, Indels: 2
0.82 0.12 0.06
Matches are distributed among these distances:
15 16 0.57
16 2 0.07
17 10 0.36
ACGTcount: A:0.47, C:0.00, G:0.02, T:0.51
Consensus pattern (15 bp):
ATATAAATATATATT
Found at i:197865 original size:16 final size:17
Alignment explanation
Indices: 197829--197873 Score: 56
Period size: 16 Copynumber: 2.6 Consensus size: 17
197819 CTTGGATATT
*
197829 ATAATTTTAATAATAAAA
1 ATAATATTAA-AATAAAA
197847 ATAATATTAAAAT-AAA
1 ATAATATTAAAATAAAA
*
197863 ATAAAATTAAA
1 ATAATATTAAA
197874 CAATGATGTC
Statistics
Matches: 25, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
16 13 0.52
17 3 0.12
18 9 0.36
ACGTcount: A:0.67, C:0.00, G:0.00, T:0.33
Consensus pattern (17 bp):
ATAATATTAAAATAAAA
Found at i:198144 original size:33 final size:31
Alignment explanation
Indices: 198100--198168 Score: 93
Period size: 31 Copynumber: 2.2 Consensus size: 31
198090 GTAAACCTTC
* *
198100 AATTGCATTTAAATGTAATTTTTTTTTATAAAA
1 AATTGCATTTAAATATAA--ATTTTTTATAAAA
*
198133 AATTGCTTTTAAATATAAATTTTTTATAAAA
1 AATTGCATTTAAATATAAATTTTTTATAAAA
198164 AATTG
1 AATTG
198169 ACTTAGGTAG
Statistics
Matches: 33, Mismatches: 3, Indels: 2
0.87 0.08 0.05
Matches are distributed among these distances:
31 17 0.52
33 16 0.48
ACGTcount: A:0.42, C:0.03, G:0.06, T:0.49
Consensus pattern (31 bp):
AATTGCATTTAAATATAAATTTTTTATAAAA
Found at i:201776 original size:17 final size:17
Alignment explanation
Indices: 201754--201791 Score: 76
Period size: 17 Copynumber: 2.2 Consensus size: 17
201744 GTTATATCGA
201754 AACATCAAAATGTTTTC
1 AACATCAAAATGTTTTC
201771 AACATCAAAATGTTTTC
1 AACATCAAAATGTTTTC
201788 AACA
1 AACA
201792 AGTTCAATAG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 21 1.00
ACGTcount: A:0.45, C:0.18, G:0.05, T:0.32
Consensus pattern (17 bp):
AACATCAAAATGTTTTC
Found at i:204564 original size:2 final size:2
Alignment explanation
Indices: 204557--204593 Score: 74
Period size: 2 Copynumber: 18.5 Consensus size: 2
204547 AATTATCCAA
204557 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
204594 AATTTTATGA
Statistics
Matches: 35, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 35 1.00
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
AT
Found at i:204735 original size:2 final size:2
Alignment explanation
Indices: 204728--204752 Score: 50
Period size: 2 Copynumber: 12.5 Consensus size: 2
204718 TTATTTACAG
204728 TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA T
204753 GAGTTATTTA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 23 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:206016 original size:29 final size:29
Alignment explanation
Indices: 205973--206055 Score: 139
Period size: 29 Copynumber: 2.8 Consensus size: 29
205963 CTCACCTAAC
205973 TAAATTGATGTAAGCAATGACATCATTAAT
1 TAAA-TGATGTAAGCAATGACATCATTAAT
*
206003 TAAATGATGTAAGCAATGACATCTTTAAT
1 TAAATGATGTAAGCAATGACATCATTAAT
*
206032 TAAATGATGTAAGTAATGACATCA
1 TAAATGATGTAAGCAATGACATCA
206056 ATTTAGTTTG
Statistics
Matches: 50, Mismatches: 3, Indels: 1
0.93 0.06 0.02
Matches are distributed among these distances:
29 46 0.92
30 4 0.08
ACGTcount: A:0.43, C:0.10, G:0.14, T:0.33
Consensus pattern (29 bp):
TAAATGATGTAAGCAATGACATCATTAAT
Found at i:210770 original size:29 final size:29
Alignment explanation
Indices: 210727--210809 Score: 139
Period size: 29 Copynumber: 2.8 Consensus size: 29
210717 CTCACCTAAC
210727 TAAATTGATGTAAGCAATGACATCATTAAT
1 TAAA-TGATGTAAGCAATGACATCATTAAT
*
210757 TAAATGATGTAAGCAATGACATCTTTAAT
1 TAAATGATGTAAGCAATGACATCATTAAT
*
210786 TAAATGATGTAAGTAATGACATCA
1 TAAATGATGTAAGCAATGACATCA
210810 ATTTAGTTTG
Statistics
Matches: 50, Mismatches: 3, Indels: 1
0.93 0.06 0.02
Matches are distributed among these distances:
29 46 0.92
30 4 0.08
ACGTcount: A:0.43, C:0.10, G:0.14, T:0.33
Consensus pattern (29 bp):
TAAATGATGTAAGCAATGACATCATTAAT
Found at i:215175 original size:21 final size:21
Alignment explanation
Indices: 215141--215180 Score: 55
Period size: 21 Copynumber: 1.9 Consensus size: 21
215131 CATTTTTCAC
*
215141 ATTGAATTTTTAAAAGTTATTA
1 ATTGAATTATTAAAA-TTATTA
215163 ATTG-ATTATTAAAATTAT
1 ATTGAATTATTAAAATTAT
215181 CGATTTGTAA
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
20 4 0.24
21 9 0.53
22 4 0.24
ACGTcount: A:0.42, C:0.00, G:0.07, T:0.50
Consensus pattern (21 bp):
ATTGAATTATTAAAATTATTA
Found at i:221631 original size:27 final size:27
Alignment explanation
Indices: 221600--221657 Score: 73
Period size: 27 Copynumber: 2.1 Consensus size: 27
221590 TGTTCTTTAC
*
221600 CCTCAACTTCTTCT-TCTTTATCTTCCT
1 CCTCAACTCCTTCTATCTTT-TCTTCCT
* *
221627 CCTCATCTCCTTCTATGTTTTCTTCCT
1 CCTCAACTCCTTCTATCTTTTCTTCCT
221654 CCTC
1 CCTC
221658 CATCATATTA
Statistics
Matches: 27, Mismatches: 3, Indels: 2
0.84 0.09 0.06
Matches are distributed among these distances:
27 23 0.85
28 4 0.15
ACGTcount: A:0.09, C:0.40, G:0.02, T:0.50
Consensus pattern (27 bp):
CCTCAACTCCTTCTATCTTTTCTTCCT
Found at i:231604 original size:2 final size:2
Alignment explanation
Indices: 231599--231630 Score: 57
Period size: 2 Copynumber: 16.5 Consensus size: 2
231589 ACGTTTTTTA
231599 AC AC AC AC AC AC AC AC AC A- AC AC AC AC AC AC A
1 AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC A
231631 TGCACATATA
Statistics
Matches: 29, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
1 1 0.03
2 28 0.97
ACGTcount: A:0.53, C:0.47, G:0.00, T:0.00
Consensus pattern (2 bp):
AC
Found at i:232336 original size:14 final size:14
Alignment explanation
Indices: 232313--232359 Score: 51
Period size: 14 Copynumber: 3.4 Consensus size: 14
232303 ACCCTAAACT
*
232313 TAAATATTAATCTC
1 TAAATTTTAATCTC
232327 TAAATTTTAATCAT-
1 TAAATTTTAATC-TC
* *
232341 TAAATTATAAACTC
1 TAAATTTTAATCTC
232355 TAAAT
1 TAAAT
232360 ACTACTCTAT
Statistics
Matches: 28, Mismatches: 3, Indels: 4
0.80 0.09 0.11
Matches are distributed among these distances:
13 1 0.04
14 26 0.93
15 1 0.04
ACGTcount: A:0.47, C:0.11, G:0.00, T:0.43
Consensus pattern (14 bp):
TAAATTTTAATCTC
Found at i:239207 original size:28 final size:28
Alignment explanation
Indices: 239170--239225 Score: 85
Period size: 28 Copynumber: 2.0 Consensus size: 28
239160 TTTGTTTACA
* *
239170 TTATGTCATCGAGTCAATGCTTGAAAGC
1 TTATGGCATCGAGCCAATGCTTGAAAGC
*
239198 TTATGGCATCGAGCCAGTGCTTGAAAGC
1 TTATGGCATCGAGCCAATGCTTGAAAGC
239226 AACGACGATG
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
28 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.29
Consensus pattern (28 bp):
TTATGGCATCGAGCCAATGCTTGAAAGC
Found at i:242999 original size:19 final size:19
Alignment explanation
Indices: 242961--243023 Score: 67
Period size: 19 Copynumber: 3.2 Consensus size: 19
242951 AAAAATACTT
242961 AAAATAAAGGATAAATTGA
1 AAAATAAAGGATAAATTGA
242980 AGAAAT-AAGGA-AAATATGA
1 A-AAATAAAGGATAAAT-TGA
*
242999 AAAATTAATGGACTAAATTGA
1 AAAA-TAAAGGA-TAAATTGA
243020 AAAA
1 AAAA
243024 AATATTATAA
Statistics
Matches: 37, Mismatches: 1, Indels: 10
0.77 0.02 0.21
Matches are distributed among these distances:
18 7 0.19
19 11 0.30
20 8 0.22
21 7 0.19
22 4 0.11
ACGTcount: A:0.62, C:0.02, G:0.16, T:0.21
Consensus pattern (19 bp):
AAAATAAAGGATAAATTGA
Found at i:244238 original size:183 final size:184
Alignment explanation
Indices: 244005--244391 Score: 647
Period size: 184 Copynumber: 2.1 Consensus size: 184
243995 TTTTCTAATT
* * * *
244005 TATATAA-AAATTAAATATTTTTTAATTCAAAAAAAGTTTATAATTAATTTAAATAATATATAAT
1 TATATAATATATTTAATATTTTTTAATTCAAAAAAAGTTTACAAATAATTTAAATAATATATAAT
244069 TATAAAAT-AAAAATTTAGATAAATTTTTTAATTAATTAATATTGATTTAAGTTTAAAAGTTATT
66 TATAAAATAAAAAATTTAGATAAATTTTTTAATTAATTAATATTGATTTAAGTTTAAAAGTTATT
* **
244133 GGATCTTAAATTATTAATTGGGTTTTAAATGGTTTGGGCTT-AGTCCATATGTTA
131 GGATCTTAAATTATTAATTGGGTTTTAAATGATTTGGG-TTAAACCCATATGTTA
244187 TATATAATATATTTAATATTTTTTAATT-AAAAAACAGTTTACAAATAATTTAAATAATATATAA
1 TATATAATATATTTAATATTTTTTAATTCAAAAAA-AGTTTACAAATAATTTAAATAATATATAA
* *
244251 TTATAAAATAAAAAATTTATATAATTTTTTTAATTAATTAATATTGATTTAAGTTTAAAAGTTAT
65 TTATAAAATAAAAAATTTAGATAAATTTTTTAATTAATTAATATTGATTTAAGTTTAAAAGTTAT
244316 TGGATCTTAAATTATTAATTGGGTTTTAAATGATTTGGGTTAAACCCATATGTTA
130 TGGATCTTAAATTATTAATTGGGTTTTAAATGATTTGGGTTAAACCCATATGTTA
244371 TATATAATATATTTAATATTT
1 TATATAATATATTTAATATTT
244392 AAAATTTAAT
Statistics
Matches: 192, Mismatches: 9, Indels: 6
0.93 0.04 0.03
Matches are distributed among these distances:
182 13 0.07
183 56 0.29
184 123 0.64
ACGTcount: A:0.43, C:0.03, G:0.08, T:0.46
Consensus pattern (184 bp):
TATATAATATATTTAATATTTTTTAATTCAAAAAAAGTTTACAAATAATTTAAATAATATATAAT
TATAAAATAAAAAATTTAGATAAATTTTTTAATTAATTAATATTGATTTAAGTTTAAAAGTTATT
GGATCTTAAATTATTAATTGGGTTTTAAATGATTTGGGTTAAACCCATATGTTA
Found at i:244416 original size:9 final size:9
Alignment explanation
Indices: 244397--244430 Score: 59
Period size: 9 Copynumber: 3.7 Consensus size: 9
244387 TATTTAAAAT
244397 TTAATTTCGG
1 TTAA-TTCGG
244407 TTAATTCGG
1 TTAATTCGG
244416 TTAATTCGG
1 TTAATTCGG
244425 TTAATT
1 TTAATT
244431 AACTGAATTC
Statistics
Matches: 24, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
9 20 0.83
10 4 0.17
ACGTcount: A:0.24, C:0.09, G:0.18, T:0.50
Consensus pattern (9 bp):
TTAATTCGG
Found at i:247976 original size:12 final size:12
Alignment explanation
Indices: 247942--247976 Score: 54
Period size: 11 Copynumber: 3.0 Consensus size: 12
247932 CAGCTTATAT
247942 AAGATTCTTTCA
1 AAGATTCTTTCA
247954 AAG-TTCTTTCA
1 AAGATTCTTTCA
*
247965 AAGATACTTTCA
1 AAGATTCTTTCA
247977 TAGTGTGTTA
Statistics
Matches: 21, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
11 11 0.52
12 10 0.48
ACGTcount: A:0.34, C:0.17, G:0.09, T:0.40
Consensus pattern (12 bp):
AAGATTCTTTCA
Done.