Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001611.1 Hibiscus syriacus cultivar Beakdansim tig00003200_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81657

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1240--1328
40
2.2
40
97
0
169
22
32
22
22
1.98
12158--12197
19
2.0
20
85
9
55
67
2
2
27
1.16
13650--13684
18
1.9
18
88
0
52
62
2
0
34
1.10
21221--21251
2
15.5
2
93
0
53
48
3
0
48
1.17
28991--29102
57
2.0
57
96
0
206
33
9
25
31
1.89
29695--29731
2
19.0
2
94
5
67
48
0
0
51
1.00
44710--44776
29
2.3
28
87
5
89
23
29
8
37
1.86
52396--52619
77
2.9
76
79
6
254
41
9
12
36
1.75
52380--52655
77
3.6
76
78
6
243
41
10
13
35
1.77
52380--52694
154
2.1
153
79
5
332
40
9
13
36
1.77
52697--52737
20
2.1
20
86
4
57
36
4
9
48
1.58
53019--53479
76
6.1
77
83
6
519
35
16
8
38
1.80
53155--53274
38
3.2
38
67
7
91
35
16
5
41
1.73
53019--53479
153
3.0
152
83
5
533
35
16
8
38
1.80
53464--53491
12
2.3
12
100
0
56
64
0
0
35
0.94
53656--53798
77
1.9
77
85
2
198
43
11
7
37
1.70
57185--57224
21
1.9
21
89
0
62
37
7
25
30
1.83
62400--62443
2
22.0
2
100
0
88
50
0
0
50
1.00
65320--65366
24
2.0
24
100
0
94
63
10
8
17
1.49
67378--67683
111
2.7
111
78
11
313
40
19
25
14
1.90
73019--73066
20
2.4
20
92
0
78
39
14
37
8
1.76
75358--75397
17
2.3
19
87
12
59
35
2
2
60
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75567--75608
2
21.0
2
95
0
75
52
0
0
47
1.00
76745--76815
30
2.4
29
79
6
72
54
0
7
38
1.27
76887--76955
35
2.0
35
94
5
122
26
17
10
46
1.79
78140--78175
2
19.0
2
88
11
58
50
0
0
50
1.00
78142--78188
20
2.3
20
85
0
58
46
8
0
44
1.33

Tables:   1

The End!