Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001613.1 Hibiscus syriacus cultivar Beakdansim tig00003204_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119945

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
751--787
18
2.0
19
94
5
67
48
0
2
48
1.15
18858--18920
31
2.0
32
93
3
110
44
11
12
31
1.78
21917--21957
21
2.0
21
85
9
57
78
4
17
0
0.93
21971--22008
6
6.3
6
100
0
76
15
0
68
15
1.22
25749--25794
23
2.0
22
87
4
65
32
2
6
58
1.36
30222--30256
17
2.1
17
88
0
52
68
0
14
17
1.21
31417--31447
2
15.5
2
100
0
62
48
0
0
51
1.00
34206--34276
31
2.3
31
87
0
106
22
19
15
42
1.89
38228--38274
20
2.3
20
96
0
85
29
23
21
25
1.99
44107--44185
38
2.1
38
95
0
140
30
16
11
41
1.83
48348--48395
25
1.9
25
83
8
62
31
16
8
43
1.78
50538--50570
16
2.1
16
100
0
66
63
24
6
6
1.40
50644--50683
14
2.9
14
85
3
55
57
27
12
2
1.48
52601--52683
41
2.0
41
100
0
166
49
12
19
19
1.79
53851--53947
51
2.0
49
89
6
151
35
11
4
49
1.58
60610--61057
229
2.0
226
95
1
806
45
7
7
39
1.61
61123--61168
20
2.3
19
89
10
74
54
10
17
17
1.70
61290--61336
20
2.4
19
82
10
67
53
10
17
19
1.72
61299--61341
20
2.3
19
88
11
63
51
11
16
20
1.75
61662--61734
23
3.2
23
88
0
101
34
4
21
39
1.73
63171--63233
11
5.9
11
75
14
69
57
0
1
41
1.08
63354--63411
7
8.4
7
88
1
73
56
24
0
18
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63359--63413
21
2.6
21
91
0
92
54
23
0
21
1.45
63359--63413
14
3.9
14
87
0
83
54
23
0
21
1.45
86199--86265
29
2.3
29
85
12
84
56
1
1
40
1.17
86495--86554
28
2.1
28
100
0
120
40
21
10
28
1.85
93058--93292
71
3.3
69
83
9
294
25
17
16
41
1.89
94310--94367
9
6.8
9
76
7
50
63
0
0
36
0.94
94298--94381
33
2.5
34
94
3
152
59
0
0
40
0.97
94549--94581
18
1.9
18
88
11
52
36
0
18
45
1.49
110365--110429
33
2.0
33
93
0
112
30
15
12
41
1.84

Tables:   1

The End!