Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001614.1 Hibiscus syriacus cultivar Beakdansim tig00003205_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56176

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6806--6835
15
2.0
15
100
0
60
33
13
20
33
1.91
8389--8445
29
1.9
30
89
3
89
38
7
10
43
1.66
8385--8453
30
2.3
29
82
2
93
34
11
8
44
1.72
14750--14842
29
3.2
29
76
8
107
52
3
6
37
1.43
20890--20917
2
14.0
2
100
0
56
50
0
50
0
1.00
21535--21599
25
2.5
26
87
2
87
41
1
3
53
1.25
23092--23437
78
4.5
78
93
2
565
11
26
13
49
1.76
23092--23437
155
2.2
154
92
3
561
11
26
13
49
1.76
24149--24175
2
13.5
2
100
0
54
51
0
0
48
1.00
28577--28612
16
2.2
16
95
0
63
38
16
8
36
1.79
30193--30266
29
2.6
29
84
0
94
41
14
9
33
1.79
30658--30761
2
54.5
2
76
9
92
51
0
0
48
1.00
30714--30753
19
2.1
19
85
0
53
55
0
0
45
0.99
31099--31158
29
2.1
27
87
6
84
56
1
0
41
1.09
31099--31160
16
4.1
15
76
16
65
58
1
0
40
1.08
38680--38750
23
3.1
23
81
4
72
47
18
18
15
1.82
38696--38757
23
2.7
23
85
5
81
50
22
14
12
1.77
41615--41649
16
2.2
16
90
5
54
37
2
22
37
1.69
48598--48629
16
2.0
16
100
0
64
37
18
6
37
1.76

Tables:   1

The End!