Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001616.1 Hibiscus syriacus cultivar Beakdansim tig00003209_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59648

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
215--309
21
4.5
21
88
6
113
20
27
33
18
1.96
312--359
21
2.3
21
85
0
60
22
12
39
25
1.89
2057--2176
32
3.8
32
68
23
76
61
4
0
34
1.15
2069--2145
32
2.4
32
80
12
95
61
1
0
37
1.05
2775--2800
7
3.7
7
100
0
52
42
15
0
42
1.47
6860--6944
37
2.3
39
86
8
115
41
17
4
36
1.71
6992--7038
23
2.0
23
100
0
94
27
21
8
42
1.81
17736--17799
22
3.0
22
76
15
71
50
1
7
40
1.41
21071--21107
12
2.7
14
84
15
51
27
27
29
16
1.97
23204--23270
29
2.3
29
76
0
71
58
4
10
26
1.50
29598--30056
51
9.0
50
86
3
575
18
16
27
38
1.91
29598--30056
102
4.5
102
91
3
678
18
16
27
38
1.91
30704--30733
3
10.0
3
92
0
51
70
0
0
30
0.88
34646--34690
18
2.5
18
100
0
90
40
11
24
24
1.87
39776--39825
16
3.2
16
80
11
68
50
4
0
46
1.20
39771--39819
14
3.4
14
81
10
62
55
4
0
40
1.19
40179--40223
21
2.1
21
83
0
54
24
6
0
68
1.13
49394--49458
29
2.2
29
97
0
121
23
26
36
13
1.92
49402--49466
29
2.4
27
87
10
89
23
29
33
13
1.93
54737--54801
21
3.1
21
97
0
121
23
24
24
27
2.00

Tables:   1

The End!