Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001617.1 Hibiscus syriacus cultivar Beakdansim tig00003214_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73843

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2730--2778
21
2.2
23
89
7
75
59
0
0
40
0.98
15237--15263
2
13.5
2
100
0
54
48
0
0
51
1.00
21824--21888
19
3.2
21
64
28
50
38
3
10
47
1.54
21819--21894
39
2.1
36
83
13
95
40
2
9
47
1.49
23024--23112
40
2.2
40
89
0
133
46
22
8
22
1.80
25155--25196
18
2.3
18
87
0
57
42
0
4
52
1.22
25166--25208
18
2.4
18
88
0
59
46
2
2
48
1.27
26279--26332
25
2.0
25
82
10
63
44
7
1
46
1.42
31532--31567
16
2.2
17
90
5
56
50
2
0
47
1.15
32948--33013
33
2.0
34
90
3
107
39
21
10
28
1.86
46802--46841
20
2.0
21
85
9
57
55
0
0
45
0.99
47363--47404
20
2.2
19
91
4
66
42
9
23
23
1.83
49408--49583
60
2.9
60
84
5
203
42
5
18
34
1.72
51589--51613
12
2.1
12
100
0
50
76
8
0
16
1.02
51698--51737
2
20.0
2
100
0
80
50
0
0
50
1.00
60032--60069
20
1.9
20
88
0
58
21
26
10
42
1.85
64485--64536
9
6.1
9
76
13
56
63
1
0
34
1.06
64482--64534
16
3.2
17
84
10
65
66
1
0
32
1.03
64488--64537
17
3.0
17
91
2
75
60
4
0
36
1.16
72657--72706
2
26.0
2
92
8
86
52
0
0
48
1.00
73658--73759
4
26.5
4
83
11
133
30
0
20
49
1.50
73658--73759
19
5.1
20
85
10
120
30
0
20
49
1.50

Tables:   1

The End!