Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001632.1 Hibiscus syriacus cultivar Beakdansim tig00003253_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66248

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--92
24
2.8
24
95
2
118
16
28
26
28
1.97
199--284
23
3.7
23
70
14
77
20
25
25
27
1.99
5734--5773
16
2.4
17
83
4
55
22
5
25
47
1.71
6335--6421
23
3.7
23
73
19
81
20
25
26
27
1.99
7252--7287
7
5.1
7
86
0
54
27
25
2
44
1.68
7621--7665
22
2.1
22
84
12
58
20
0
28
51
1.48
11724--11771
24
2.0
24
95
0
87
39
12
14
33
1.84
12574--12669
50
1.9
51
82
6
124
54
1
5
39
1.30
15628--15668
17
2.4
17
84
11
57
63
0
29
7
1.21
16369--16409
17
2.3
19
87
8
59
17
4
12
65
1.42
16637--16674
4
9.8
4
88
11
53
23
0
0
76
0.79
17323--17356
16
2.1
17
89
10
54
17
8
0
73
1.08
17300--17359
15
4.0
14
74
18
50
18
8
1
71
1.19
18934--19014
36
2.3
36
87
6
112
49
4
18
27
1.68
26824--26902
3
26.0
3
87
7
115
64
0
0
35
0.94
27123--27464
139
2.5
139
84
2
429
28
18
12
40
1.87
27579--27788
112
1.9
113
87
3
316
28
20
15
36
1.92
27718--28171
124
3.7
124
92
0
737
26
19
14
39
1.90
29689--29728
9
4.7
9
84
12
57
0
15
0
85
0.61
29682--29746
17
3.9
17
76
9
53
4
13
0
81
0.84
29682--29746
25
2.6
25
85
9
96
4
13
0
81
0.84
37055--37088
15
2.3
15
94
0
59
50
8
17
23
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41272--41329
22
2.7
22
79
12
66
65
3
0
31
1.09
42611--42677
3
22.0
3
79
8
73
67
0
0
32
0.91
42611--42682
28
2.6
28
82
4
94
69
0
0
30
0.89
43712--43743
15
2.1
16
94
5
57
25
0
0
75
0.81
46106--46161
16
3.5
16
100
0
112
30
14
17
37
1.90
46271--46307
19
1.9
19
88
0
56
32
21
27
18
1.97
49346--49506
53
3.0
53
91
1
270
28
16
18
36
1.92
52400--52457
25
2.3
25
96
0
107
18
13
18
48
1.81
53742--53775
10
3.4
10
91
0
59
50
11
11
26
1.73
56805--56855
25
2.0
26
81
11
61
60
1
13
23
1.43
58063--58327
136
1.9
137
89
0
415
25
16
23
34
1.95
58236--58386
53
2.8
53
86
3
178
26
17
22
33
1.96
58151--58523
190
2.0
190
88
0
557
25
17
24
33
1.96

Tables:   1

The End!