Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001640.1 Hibiscus syriacus cultivar Beakdansim tig00003280_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51650

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15880--15922
18
2.4
18
100
0
86
37
6
16
39
1.75
23163--23363
6
31.0
6
67
20
63
72
0
18
7
1.13
23214--23301
8
10.4
8
70
13
52
70
1
18
10
1.21
23188--23245
22
2.7
22
81
5
66
74
0
17
8
1.06
23169--23363
55
3.5
56
74
16
158
72
1
18
7
1.13
23287--23324
11
3.4
11
83
16
51
81
2
10
5
0.94
23296--23336
19
2.2
18
86
8
55
80
2
14
2
0.92
23366--23450
45
1.9
44
85
2
116
36
18
29
15
1.92
24605--24676
37
2.0
36
91
2
117
37
23
20
18
1.94
24693--24946
55
4.7
53
78
10
214
28
16
23
31
1.96
26994--27038
21
2.1
21
87
0
63
31
28
24
15
1.96
28601--28915
149
2.1
149
95
0
567
27
16
21
34
1.95
32059--32206
76
1.9
76
83
5
192
34
13
24
27
1.93
33134--33169
2
18.5
2
94
5
65
50
0
0
50
1.00
35199--35266
3
22.3
3
75
8
57
63
2
1
32
1.18
45433--45472
19
2.2
18
90
4
62
42
7
0
50
1.30

Tables:   1

The End!