Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001646.1 Hibiscus syriacus cultivar Beakdansim tig00003295_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64219

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1452--1511
21
2.8
21
89
2
93
23
35
16
25
1.95
3392--3462
30
2.4
31
83
11
94
36
25
5
32
1.79
8094--8162
23
3.0
23
84
0
93
26
24
27
21
1.99
11188--11390
101
2.0
101
100
0
406
21
26
19
32
1.97
15820--15862
21
2.0
21
95
0
77
60
0
0
39
0.97
27836--27984
5
30.0
5
99
0
291
39
0
0
60
0.97
38651--38687
16
2.3
16
90
0
56
27
0
18
54
1.44
38692--38945
81
3.0
81
82
6
292
34
13
16
34
1.89
38692--39001
88
3.6
83
79
9
304
34
15
17
33
1.91
49850--49892
18
2.4
18
80
7
52
44
6
6
41
1.58
56876--56900
4
6.2
4
100
0
50
24
0
24
52
1.48
57602--57627
2
13.0
2
100
0
52
0
50
0
50
1.00
60626--60688
31
2.1
30
81
3
72
31
17
6
44
1.74
61060--61112
21
2.5
21
81
6
72
20
26
18
33
1.96
61139--61216
41
1.9
41
91
0
129
38
25
17
17
1.92
61144--61236
20
4.6
20
82
7
107
33
26
19
20
1.96
61144--61256
20
5.6
20
79
9
95
34
25
18
21
1.96
61426--61470
22
2.2
20
84
8
54
26
40
8
24
1.84
61702--61745
20
2.2
20
87
0
61
11
18
20
50
1.77
63635--63690
20
2.8
21
76
13
64
39
19
23
17
1.92
63752--63819
20
3.5
20
80
9
77
14
22
23
39
1.91

Tables:   1

The End!