Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001654.1 Hibiscus syriacus cultivar Beakdansim tig00003310_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43145

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4739--4764
12
2.2
12
100
0
52
0
38
34
26
1.57
6428--6489
20
2.9
21
83
7
72
16
25
32
25
1.96
15158--15252
21
4.4
21
81
9
86
27
26
22
24
2.00
15177--15256
21
3.7
21
86
5
97
25
26
25
23
2.00
16775--16818
21
2.1
21
82
0
52
9
38
15
36
1.80
17916--18076
66
2.5
67
87
4
222
29
22
19
27
1.98
18048--18096
19
2.6
19
84
9
57
24
28
20
26
1.99
19023--19074
27
2.0
26
84
3
68
38
17
19
25
1.93
30265--30313
13
3.8
13
80
0
62
20
44
16
18
1.86
30313--30369
8
7.5
8
75
22
52
15
36
26
21
1.93
30308--30337
13
2.3
13
94
0
51
20
46
20
13
1.83
30313--30369
15
3.8
15
84
9
64
15
36
26
21
1.93
35276--35324
13
3.8
13
80
0
62
20
44
16
18
1.86
35324--35380
8
7.5
8
75
22
52
15
36
26
21
1.93
35319--35348
13
2.3
13
94
0
51
20
46
20
13
1.83
35324--35380
15
3.8
15
84
9
64
15
36
26
21
1.93
42199--42231
14
2.3
15
89
5
50
0
24
0
75
0.80
42731--42767
9
3.9
10
89
10
51
0
21
0
78
0.75
42105--43145
532
2.0
526
97
1
1976
31
14
15
38
1.88

Tables:   1

The End!