Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001661.1 Hibiscus syriacus cultivar Beakdansim tig00003320_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46805

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6187--6364
43
4.2
43
81
3
146
34
17
15
31
1.92
6198--6365
42
4.0
43
84
1
160
35
18
16
29
1.92
7008--7075
34
2.0
34
85
0
91
33
20
17
27
1.95
8378--8439
30
2.1
30
84
6
81
30
8
8
53
1.59
8529--8640
59
1.9
59
85
7
156
33
11
11
43
1.77
8617--8653
19
1.9
19
100
0
74
37
8
10
43
1.69
9758--9817
25
2.5
24
91
5
102
56
1
6
35
1.35
13038--13191
64
2.4
65
77
10
174
35
20
18
25
1.95
13566--13675
29
3.8
29
88
7
170
46
16
20
16
1.84
16651--16904
101
2.6
100
80
13
301
53
11
3
31
1.53
17231--17260
12
2.6
12
94
5
53
63
10
0
26
1.26
16662--17347
330
2.1
316
86
7
945
53
11
3
31
1.53
17729--17824
38
2.6
38
81
6
117
25
17
17
39
1.91
34284--34332
23
2.1
23
85
7
64
57
14
2
26
1.48
37658--37804
60
2.4
59
80
6
154
34
14
17
32
1.91
39332--39385
20
2.6
21
76
2
65
29
16
7
46
1.74
43226--43276
19
2.5
20
90
9
77
43
13
17
25
1.86
45718--45750
14
2.4
14
94
0
57
39
0
9
51
1.34

Tables:   1

The End!