Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001663.1 Hibiscus syriacus cultivar Beakdansim tig00003327_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45250

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7908--8382
182
2.6
182
85
2
641
42
11
16
28
1.84
8303--8349
20
2.4
19
79
10
58
53
8
17
21
1.70
10489--10521
15
2.2
15
94
0
57
18
9
63
9
1.49
10605--10645
21
2.0
21
90
0
64
41
12
26
19
1.87
10920--10974
15
3.5
15
73
22
58
52
0
43
3
1.18
10904--10990
33
2.6
33
94
3
149
51
0
44
3
1.18
12535--12583
19
2.5
20
90
9
84
30
2
10
57
1.43
12818--13399
200
2.9
200
94
1
1014
35
14
18
31
1.91
15250--15597
183
1.9
184
90
1
556
37
13
15
33
1.87
18297--18800
181
2.8
181
95
1
906
41
13
17
27
1.87
18658--18931
143
1.9
144
94
0
487
44
14
17
24
1.85
18798--20004
182
6.6
182
94
1
2091
42
12
17
27
1.85
21482--21511
11
2.6
11
94
5
51
86
0
3
10
0.67
24703--25078
188
2.0
188
99
0
743
26
15
16
40
1.88
38535--38595
31
2.0
30
84
6
79
44
8
16
31
1.77

Tables:   1

The End!