Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001677.1 Hibiscus syriacus cultivar Beakdansim tig00003354_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  162409

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142234--142272
19
2.1
19
85
0
51
53
2
2
41
1.28
142118--142493
176
2.1
175
97
0
707
44
2
5
47
1.39
142410--142448
19
2.1
19
85
0
51
53
2
5
38
1.37
143089--143171
31
2.7
31
100
0
166
45
4
26
22
1.72
145528--145578
26
2.0
25
81
11
59
54
5
0
39
1.24
145562--145661
24
4.4
23
76
14
82
44
7
3
46
1.46
145602--145663
22
2.8
21
78
9
61
43
6
3
46
1.45
145573--145662
24
3.8
24
75
15
89
45
5
3
45
1.43
148958--148987
15
2.0
15
93
0
51
30
6
10
53
1.60
152967--153020
23
2.3
23
93
0
90
25
27
22
24
2.00
156124--156196
30
2.5
31
82
13
91
39
9
19
31
1.84
157146--157217
31
2.4
31
88
4
112
34
5
23
36
1.78

Tables:   1   2

The End!