Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001691.1 Hibiscus syriacus cultivar Beakdansim tig00003379_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59364

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7290--7342
14
3.9
14
81
16
58
20
3
0
75
0.96
7290--7342
27
1.9
28
85
11
74
20
3
0
75
0.96
7290--7343
20
2.7
18
81
18
54
20
3
0
75
0.95
8175--8400
81
2.8
81
79
4
229
36
17
13
32
1.89
8199--8972
82
9.5
82
82
4
762
36
16
11
35
1.85
8205--8972
164
4.7
163
85
1
916
36
16
11
35
1.85
8178--8972
41
19.5
41
72
4
509
36
16
12
34
1.86
9053--9098
20
2.3
20
100
0
92
39
13
0
47
1.42
10637--10823
68
2.8
68
91
1
295
30
13
9
47
1.74
12865--12898
4
8.5
4
100
0
68
76
0
0
23
0.79
17362--17412
25
2.0
25
100
0
102
39
15
3
41
1.66
17609--17640
2
16.0
2
100
0
64
50
0
0
50
1.00
24001--24219
111
2.0
111
97
0
411
27
19
20
32
1.97
24415--25039
312
2.0
312
98
0
1214
35
16
19
29
1.93
29731--29783
15
3.5
15
78
16
56
16
15
7
60
1.57
39360--39417
31
1.9
29
86
6
80
43
10
6
39
1.66
41237--41279
22
2.0
22
85
0
59
46
0
4
48
1.22
46215--46271
29
2.0
28
89
3
87
42
14
5
38
1.68
49186--49307
32
3.8
32
87
2
165
35
15
19
29
1.93
49197--49328
32
4.1
31
78
14
112
33
15
20
30
1.94
49197--49328
64
2.1
64
82
5
160
33
15
20
30
1.94

Tables:   1

The End!