Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001692.1 Hibiscus syriacus cultivar Beakdansim tig00003380_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59239

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
628--693
20
3.2
19
72
12
51
22
3
0
74
0.96
1971--2041
35
2.0
36
91
2
117
42
4
5
47
1.46
2022--2052
2
15.5
2
93
0
53
48
3
0
48
1.17
5148--5477
113
3.0
111
86
5
447
37
15
19
27
1.92
5946--6005
3
20.0
3
83
6
77
33
1
0
65
1.03
17431--17484
23
2.3
23
83
0
81
20
27
24
27
1.99
17442--17491
23
2.2
23
85
0
64
22
26
22
30
1.99
18734--18770
3
12.0
3
88
5
56
70
0
0
29
0.88
18734--18773
19
2.1
19
95
0
71
70
0
0
30
0.88
18949--19754
39
20.5
39
81
5
676
22
23
12
41
1.87
18949--19762
78
10.3
78
83
4
916
22
23
11
42
1.87
18910--19300
202
1.9
201
92
0
647
25
22
11
40
1.88
18949--19762
117
6.9
117
82
4
945
22
23
11
42
1.87
19151--19762
39
15.7
39
90
0
837
22
23
11
42
1.86
19811--20344
45
11.7
45
89
1
618
31
19
21
28
1.97
20908--20967
22
2.7
22
92
5
86
36
13
13
36
1.84
24026--24086
18
3.2
20
75
11
65
4
19
0
75
0.98
24025--24070
23
1.9
24
86
8
67
2
19
0
78
0.86
26497--26629
14
9.4
14
72
18
57
58
8
16
16
1.61
26557--26599
13
3.1
14
87
12
63
60
9
16
13
1.58
26558--26598
21
2.0
21
100
0
82
58
9
17
14
1.62
26541--26599
27
2.1
28
84
9
77
59
10
16
13
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26583--26629
15
3.1
15
77
22
53
63
6
14
14
1.49
26557--26599
7
6.3
7
84
15
63
60
9
16
13
1.58
30424--30476
3
18.0
3
92
3
90
67
0
0
32
0.91
30850--30874
12
2.1
12
100
0
50
40
0
0
60
0.97
33036--33197
65
2.5
65
84
7
197
28
24
18
28
1.98
33167--33215
19
2.6
19
84
9
57
24
28
20
26
1.99
41715--41869
65
2.4
64
80
5
170
30
23
18
27
1.97
53726--53769
21
2.0
22
82
8
54
38
6
4
50
1.50
53791--53835
22
2.0
22
86
0
63
33
13
2
51
1.53

Tables:   1

The End!