Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001693.1 Hibiscus syriacus cultivar Beakdansim tig00003382_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52484

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3725--3755
3
10.3
3
92
0
53
64
0
35
0
0.94
4159--4233
24
3.0
25
81
14
77
77
0
14
8
0.98
4150--4211
19
3.1
19
78
13
61
75
0
14
9
1.03
4828--4861
15
2.2
16
89
5
52
50
20
20
8
1.75
6225--6400
44
4.0
43
91
2
262
28
14
30
26
1.95
6225--6400
87
2.0
87
88
2
264
28
14
30
26
1.95
6687--6812
36
3.4
36
83
4
126
25
19
18
37
1.94
7270--8235
133
7.3
133
86
3
1277
29
19
20
29
1.97
7261--7923
89
7.5
87
67
11
267
29
19
20
31
1.97
8695--8729
14
2.5
14
100
0
70
5
28
0
65
1.15
12001--12103
2
53.0
2
94
5
185
49
0
0
50
1.00
16233--16641
116
3.5
116
78
5
389
36
15
21
26
1.93
17298--17332
3
11.7
3
93
0
61
31
0
2
65
1.07
38740--38839
5
18.8
5
73
15
67
70
3
6
21
1.23
38774--38812
21
1.9
21
89
5
62
69
0
7
23
1.14
50946--51898
180
5.3
181
86
4
1231
43
13
15
28
1.84

Tables:   1

The End!