Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001696.1 Hibiscus syriacus cultivar Beakdansim tig00003386_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43560

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2997--3025
2
15.0
2
92
7
51
48
0
0
51
1.00
9480--9516
2
18.5
2
100
0
74
51
0
0
48
1.00
10999--11047
19
2.5
20
87
9
66
22
0
6
71
1.08
13107--13152
24
1.9
24
82
8
58
19
13
28
39
1.89
13934--14036
37
2.9
36
88
7
156
44
12
15
27
1.82
13932--14070
37
3.8
37
83
5
149
42
12
14
30
1.82
14958--14983
2
13.0
2
100
0
52
50
0
0
50
1.00
16163--16190
5
5.6
5
100
0
56
17
0
0
82
0.68
18752--18806
16
3.6
16
81
16
62
81
9
9
0
0.87
18757--18806
8
6.5
8
82
17
52
82
10
8
0
0.86
18760--18812
22
2.5
22
81
3
63
83
7
9
0
0.83
19474--19522
22
2.2
22
92
0
80
32
24
14
28
1.94
19931--19966
18
2.0
18
88
0
54
19
8
30
41
1.81
20443--20724
36
8.0
36
77
8
285
26
19
14
39
1.90
20469--20787
138
2.3
137
81
3
372
28
19
12
38
1.89
20699--20855
67
2.4
66
86
3
217
32
22
8
36
1.85
21497--22433
105
9.0
105
92
1
1470
33
26
17
22
1.96
22757--22854
37
2.6
37
81
0
106
42
12
13
31
1.81
23210--23252
18
2.5
18
81
7
54
23
4
2
69
1.18
23756--23842
2
44.0
2
97
2
167
49
0
0
50
1.00
24824--24880
3
18.3
3
82
13
71
36
0
0
63
0.95
26438--26523
18
4.8
18
78
16
99
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29298--29352
21
2.5
22
80
14
60
16
14
9
60
1.59
33439--33777
114
3.0
112
89
2
516
33
15
18
32
1.92
35894--35994
49
2.0
50
81
9
118
39
16
19
23
1.92
37220--37674
76
6.0
76
94
1
801
22
20
22
34
1.96
37830--37875
3
14.3
3
86
13
65
36
0
0
63
0.95
37830--37874
17
2.7
17
96
3
83
35
0
0
64
0.94

Tables:   1

The End!