Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001710.1 Hibiscus syriacus cultivar Beakdansim tig00003439_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42261

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17532--17655
37
3.3
36
77
10
117
25
21
9
42
1.83
17441--17628
37
5.0
38
72
14
138
27
23
11
37
1.89
18280--18500
119
1.9
118
87
2
327
33
14
21
30
1.94
18815--18899
43
1.9
46
88
7
131
65
0
15
18
1.26
18812--18914
44
2.3
45
78
9
131
67
0
14
17
1.22
24451--24498
22
2.2
22
81
7
53
33
12
29
25
1.92
27518--27554
3
12.3
3
100
0
74
32
0
0
67
0.91
28798--28864
20
3.3
20
95
0
116
22
29
16
31
1.96
36342--36374
16
1.9
17
88
11
50
36
15
3
45
1.61
40405--40450
24
1.9
24
90
0
74
36
2
10
50
1.50
40600--40738
61
2.2
61
84
5
170
28
16
27
27
1.97

Tables:   1

The End!