Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001713.1 Hibiscus syriacus cultivar Beakdansim tig00003465_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59279

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7546--7576
16
1.9
16
93
0
53
12
0
35
51
1.40
10299--10412
58
1.9
59
82
5
142
14
16
19
49
1.80
13634--13772
53
2.6
53
96
0
251
23
15
15
45
1.84
23168--23212
21
2.1
21
87
0
63
28
20
4
46
1.69
31246--31404
59
2.8
59
83
7
168
42
3
20
33
1.70
31290--31418
59
2.2
60
84
1
170
39
3
21
35
1.69
31642--31697
25
2.2
25
82
14
71
50
7
0
42
1.30
35855--35895
16
2.5
17
84
4
57
21
4
24
48
1.69
36456--36542
23
3.7
23
72
17
79
21
26
25
26
2.00
37525--37566
22
1.9
22
90
0
66
59
16
7
16
1.58
38197--38291
21
4.6
19
75
17
91
20
18
25
35
1.95
38206--38287
21
3.8
21
78
15
96
19
19
24
36
1.95
38197--38291
42
2.3
42
96
0
172
20
18
25
35
1.95
38413--38479
21
3.2
21
89
0
98
23
19
28
28
1.98
42397--42473
37
2.1
37
85
4
102
49
1
2
46
1.23
42839--42880
19
2.1
21
91
8
70
54
11
4
28
1.57
46317--46564
123
2.0
123
85
3
329
15
22
23
37
1.93
53183--53209
13
2.1
13
100
0
54
37
14
25
22
1.93
54605--54671
20
3.3
20
85
4
82
35
8
25
29
1.86
54626--54676
20
2.5
20
93
0
84
37
11
23
27
1.90
55981--56005
4
6.2
4
100
0
50
48
24
0
28
1.52

Tables:   1

The End!