Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001722.1 Hibiscus syriacus cultivar Beakdansim tig00003482_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98622

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2139--2176
15
2.5
15
87
12
51
76
2
15
5
1.08
3268--3329
2
31.0
2
93
6
108
50
0
1
48
1.10
6193--6230
19
2.0
19
100
0
76
26
21
26
26
1.99
6661--6746
42
2.0
43
88
2
129
29
13
24
32
1.94
8353--8392
21
1.9
21
90
10
64
20
27
5
47
1.70
9211--9244
7
4.7
7
96
3
59
11
2
11
73
1.20
16792--16853
30
2.1
30
87
6
90
41
37
4
16
1.69
22497--22575
27
2.9
28
79
11
74
59
5
0
35
1.19
22700--22746
8
6.0
8
80
14
53
65
0
0
34
0.93
22710--22750
12
3.4
12
83
10
57
70
0
0
29
0.87
22711--22756
16
2.7
18
87
9
62
69
0
0
30
0.89
26591--26670
2
40.5
2
97
2
153
50
0
0
50
1.00
35256--35295
16
2.6
15
80
7
53
57
12
5
25
1.55
44659--44725
34
2.1
31
86
8
89
26
5
13
53
1.62
57404--57524
32
3.9
30
87
4
161
25
19
21
33
1.96
65083--65124
2
21.0
2
100
0
84
50
0
0
50
1.00
77473--77506
16
2.1
17
88
5
52
64
0
0
35
0.94
79871--79945
3
25.3
3
97
2
143
33
0
0
66
0.92
96342--96377
3
12.0
3
100
0
72
66
0
0
33
0.92

Tables:   1

The End!